YALI0E27830g

Overview

Description similar to uniprot|Q02326 Saccharomyces cerevisiae YML073C (ohnolog of YLR448W) YL16A 60S large subunit ribosomal protein
Locus type CDS
Locus tag YALI0E27830g

Location

Species Yarrowia lipolytica Positions 3289353..3290026
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 674 (nuc.)
Previous locus YALI0E27808g Next locus YALI0E27852g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E27830g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E27830gYALI0E27830g_mRNA-001YALI0E27830g_CDS-001

Nucleotide sequence

 

>YALI0E27830g
ATGTCCAAGCAGATCGGAGGAGCCAAGAACGGCGGTAGCCGAACCGTCCCCACTGAGAAG
GCCCCCAAGTGGTACGTCGCTGAGCCCACTCACGTCAAGATCCCCACCGTCCAGAACAAG
TCCAAGCTGCGACCTTCTCTTGTTCCCGGTGCCGTACTCATTCTCCTTGCCGGCCGATTC
CGAGGCAAGCGAGTTGTTCTCCTCAAGTCTCTTGAGGATGGCACTCTCCTTGTGACCGGT
CCCTTCAAGGTCAACGGTGTCCCTCTCCGACGAGTCAACGCCCGATACGTCATTGCCACC
TCCACTAAGGTCGATGTCTCCGGTGTCAAGGCTGACAAGTTCACCCCTGCCTACTTCGCT
CGATCTTCCGCCGACAAGAAGGCCGAGAAGCAGTTCTTCGCCGAGGGCAAGCAGAAGGAG
CTCAAGGCCGAGCGAGTCGCCGACCAGAAGGACGTCGATGCTGCTCTCATTGCCGAGATC
AAGAAGACTCCTCTTCTCAAGCAGTACCTGGCTTCCCAGTTCTCTCTCAAGTCTGGTGAC
AAGCCCCACCTGCTCAAGTTTTAAATTATAAAAACACAAAATGGAACATGGGGGTGGAAA
ATGGTGGACGGTGGTGAAGCCGTCGTCTGTCAAAAGCTGTATAGCAATGCAATTTGAATT
TTACTTACAAGTAG

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0E27830g_CDS-001

Protein length: 188 aa.
Product: Ribosomal 60S subunit protein L6, putative

>YALI0E27830g_CDS-001 MSKQIGGAKNGGSRTVPTEKAPKWYVAEPTHVKIPTVQNKSKLRPSLVPGAVLILLAGRF
RGKRVVLLKSLEDGTLLVTGPFKVNGVPLRRVNARYVIATSTKVDVSGVKADKFTPAYFA
RSSADKKAEKQFFAEGKQKELKAERVADQKDVDAALIAEIKKTPLLKQYLASQFSLKSGD
KPHLLKF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG