YALI0E27786g

Overview

Description similar to uniprot|Q08417 Saccharomyces cerevisiae YOR049C RSB1 Suppressor of sphingoid long chain base (LCB) sensitivity of an LCB-lyase mutation
Locus type CDS
Locus tag YALI0E27786g

Location

Species Yarrowia lipolytica Positions 3283411..3284635
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1225 (nuc.)
Previous locus YALI0E27764g Next locus YALI0E27797g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E27786g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E27786gYALI0E27786g_mRNA-001YALI0E27786g_CDS-001

Nucleotide sequence

 

>YALI0E27786g
ATGAAAATCTCAACGCTCATAGTCGTGGCAGCTCTCATTGGCCTGTGTTTGGCTGCTCCC
CCCAGTGCAGAGGAGATGGGAATGACCCCAGACGAATGGTCCAACTGGGTGTACTCCCAG
TATGGTGTCTACGGAATGCGACCCAGTCGAGCCGCCAATCTCGTGGGAATGATTCTCTTC
ATTATCCTGTGGGCTATCCAAGGAGCGCTGGCCTTGTACTACCGACAATGGTGGTTTGGA
GGAGCCTTCTTCTGTGGCATCTGTCTGGAGTTTCTCGGATACCTGGGCCGATTCCTGTCC
ACCTGGGATCTCCAGAACTTGAACGAGTTCATTCTACAGATTGTCTGTCTGACTCTGGCA
CCTGCCTTCATAATGGCGGGTGTCTACTGTCTGCTGGCAAAGTTTGTCGTCATCTACGGA
GAGAGCTACAGTCGGGTAGCTCCTCTGGTGTACACATTGATCTTCGTGGCCTGTGATTTG
ATTTCCATTGTCATCCAGGCTGTAGGAGGAGGTATTTCAGCCACTGCTCTCTACGACAAC
AAGTCTACCGACGACGGAACTCACATCATGGTCGCCGGTATGGCTTTTCAGGTCTTCACC
ATGTCAATTTTCTTTATCATGACCACTGACTTCTTGTGGCGAGTGCACAAGGGTATCCGT
AACCCCAACGTCGCGGACTCTCGAGCCAATGACCCCGAAATCATTGCTATTCGAGAGTCG
CCCAAGATGAAGTACTTTGTCATTGCTACATACATTGCCTTTGGCTTTGTCTTCACTCGG
TCCGTCTACCGAGTCGTCGAGCTGGCTGAGGGCTGGTACGGCAATCTTCTTCAGCACGAG
GCCTACCTGCTTGTGCTGGACGGTCTGATGATGCTCATTGCCATCACCATTCTGACCGTC
TTCTACCCCGGCTTCGTCTGGGGCCGAACCCACATCAACGCCGGAGCTGTCAAGCATAGC
AAGAGCGAAAAAAACGAGTTCCAGGACGTTCAGCAGGAACATTACCCCGAACAGCAAGAA
TACCCGGAACAGCGAGACGATGGGTCTTACGGAAAGGAGACCGAAAGCAGTGTTTAGAAG
TCATATATAATGTATTATTTTGTTTTGAGCTACGAGAATCTAAGGCATGGGAGGCTACCC
TAAGGCCCAGATGTTTGAGACATAGGACACTGAGACCAGACATTGTGAGACAGTACTAAA
TAGGTACTCGTGCAAGCACACATGC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E27786g_CDS-001

Protein length: 359 aa.
Product: Suppressor of sphingoid LCB sensitivity of an LCB-lyase mutation, putative

>YALI0E27786g_CDS-001 MKISTLIVVAALIGLCLAAPPSAEEMGMTPDEWSNWVYSQYGVYGMRPSRAANLVGMILF
IILWAIQGALALYYRQWWFGGAFFCGICLEFLGYLGRFLSTWDLQNLNEFILQIVCLTLA
PAFIMAGVYCLLAKFVVIYGESYSRVAPLVYTLIFVACDLISIVIQAVGGGISATALYDN
KSTDDGTHIMVAGMAFQVFTMSIFFIMTTDFLWRVHKGIRNPNVADSRANDPEIIAIRES
PKMKYFVIATYIAFGFVFTRSVYRVVELAEGWYGNLLQHEAYLLVLDGLMMLIAITILTV
FYPGFVWGRTHINAGAVKHSKSEKNEFQDVQQEHYPEQQEYPEQRDDGSYGKETESSV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG