YALI0E27715g

Overview

Description similar to uniprot|P24783 Saccharomyces cerevisiae YNL112w DBP2 ATP-dependent RNA helicase of DEAD box family
Locus type CDS
Locus tag YALI0E27715g

Location

Species Yarrowia lipolytica Positions 3271865..3274338
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 2474 (nuc.)
Previous locus YALI0E27698g Next locus YALI0E27720g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E27715g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E27715gYALI0E27715g_mRNA-001YALI0E27715g_CDS-001

Nucleotide sequence

 

>YALI0E27715g
ATGTCTTACGGTGACGATTACAACAACAACGACCGAGGCTACGGCGGCGGACGAGGCTTC
GGCGGAGGCCGAGGTGGCCGAGGTGGTTCCCGAGGCGGTCGAGGCGGCTTCGGTGGCGAT
CGAGGTTTCGGAGGTGACCGAGGCGGCTACGGCGGCGGAGGCTACCAGGACAACGACTTT
GGCAACCTGCCCAAGCAGGACTGGGACCTTGAGAAGCTCCCTCAGTTTGAGAAGAACTTC
TACAAGGAGGACCCTGCTGTCACTGAGCGAACCGACGAGGAGGTCACTGCCTTCCGAAAG
GAGAACCAGATGACCCTGCACGGAGACGGTATCCCTAAGCCCGTGACCAACTTTGACGAG
GCTGGTTTCCCCCCTTACGTCCTCAAGGAGGTCAAGCAGCAGGGTTTCGAGAAGCCCACT
GCCATTCAGTGCCAGGGATGGCCCATGGCCCTGACCGGACGAGATGTCATTGGTATCGCT
TCCACCGGTTCCGGTAAGACTCTGTCTTACTGCCTGCCCGCCATTGTCCACATCAACGCC
CAGCCCATGCTGTCCCACGGTGACGGACCCATCGTCCTGGTCCTCGCCCCCACCCGAGAG
CTGGCTGTTCAGATTCAGCAGGAGTGCTCCAAGTTCGGCAAGTCTTCCAAGATTCGAAAC
ACCTGTGTCTACGGAGGTGTTCCCCGAGGCCAGCAGATTCGAGACCTTGCCCGAGGTGTG
GAGATTGTCATTGCCACTCCCGGCCGACTTCTCGATATGCTCGAGTCCGGAAAGACTAAC
CTTCGACGAGTGACCTACCTGGTTCTCGATGAGGCCGACCGAATGCTCGATATGGGTTTC
GAGCCTCAAATTCGAAAGATTGTCGACCAGATTCGACCCGACCGACAGACCCTCATGTGG
TCTGCTACCTGGCCCAAGGAGGTCCAGCGACTGGCCCACGACTACCTCAAGGACCAGATT
CAGGTCAACATTGGTTCTCTGGAGTTGTCTGCCTCTCACAACATCACCCAGGTTGTGGAG
GTCTGCACCGAGTACGAGAAGCGAGACCGACTTGTCAAGCACCTCGAGACCGTCATGGAG
AACAAGGAGTCCAAGTGTCTGATTTTCACCGGCACCAAGCGTGTCGCTGACGACATTACC
AAGTTCCTGCGACAGGACGGCTGGCCTGCTCTCGCCATTCACGGTGACAAGCAGCAGCAG
GAGCGAGACTGGGTTCTCAACGAGTTCCGACAGGGCAAGAGCCCCATCATGGTTGCCACC
GACGTGGCTTCCCGTGGTATTGGTGAGTACTAACATTTCCTTTCATTCCTATTTATTTGC
GGCTCTCTTTGGGTCCAACACTGGTGGCTTGTGCAGTTTACGTGAACAGTTACTTGTTGG
ATGCAAGTAGAGCTTCTCTATTTATTGATATCCTTGCTGGGAGCTTTTTTGCTACATCCA
CACACATATCCGATACCATCTACGATATCCCAAAAAAGAACTTCTTCTGAGTTGAGCCAT
GCAGCGAGTCGCGATTCACGTCCACTCCGACTGTTTGGTTATGACGACTCATATCCTGAG
TACACTTGTTTTTCCGAAGACGAATCCAGAGCCTCTTATTATGACCCTTTTGGAAACACG
TGTTGAGATTATGATTTGATTAATTATGCCAGGACAAGACGCATCACTTGAACGATAGAT
ATATTTAAATGCCTAAATGAACATGAACGATTTTGTGGACGGGCTTGCGTTTGAATATAT
TTGTGACCATGAAAAGAATGATCGTGTTGGAAGAATATGGGATGCTACAACTGCAGCAGA
GAGACACTGCTGTTACACTGTTGTTGAAACATTGTTGTTTCGTAGATGAAGCTTGTCTTA
CGATGTTACTGTGAGTAACTCTAAGCACGAGCATATTGTATTGTATGTGTTCATCATGAC
GGATGACGAGTTTTCTGTACTTGTCGCCACTTATTCATGTTTGTGTAGTACCATCCTTTC
CTTTGCTTCATATGTTGAACTTCCACATTCATTTATTCTGTTCTTCCAAATACTAACTCT
AGATGTCAAGGGTATCAACTTCGTTATCAACTACGACTACCCCTCCAACTCCGAGGACTA
TGTCCACCGAATCGGTCGAACTGGTCGAGCCGGCACCAAGGGTACCGCTTACACCTACTT
CACCGAGGACAACCGAAAGCAGGCCCGAGACCTTCTCGTCATCCTGCGAGAGGCCAAGCA
GCATATCGACCCCAAGCTGGAGGAGATGGGCGGTGGCCGAGGTGGCCGAGGAGGCTGGGG
AGGCCGAGGCGGTCGAGGCGGCCGTGGCGGCCGTGGTGGTTACCGACGAGGTGGCTACGG
CGGCGGTGGCTATGGTGGAGGACGAGGTTCCGACATCACCGGCTCCAACTCCGCTCCTCT
TTCCAACTCCCGATGGTAGACTAACTAAAACTTCATAGAAAAAATGGTATAGATTAATTG
ACTTTCAAATGAAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E27715g_CDS-001

Protein length: 553 aa.
Product: ATP-dependent RNA helicase of the DEAD-box protein family, putative

>YALI0E27715g_CDS-001 MSYGDDYNNNDRGYGGGRGFGGGRGGRGGSRGGRGGFGGDRGFGGDRGGYGGGGYQDNDF
GNLPKQDWDLEKLPQFEKNFYKEDPAVTERTDEEVTAFRKENQMTLHGDGIPKPVTNFDE
AGFPPYVLKEVKQQGFEKPTAIQCQGWPMALTGRDVIGIASTGSGKTLSYCLPAIVHINA
QPMLSHGDGPIVLVLAPTRELAVQIQQECSKFGKSSKIRNTCVYGGVPRGQQIRDLARGV
EIVIATPGRLLDMLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMW
SATWPKEVQRLAHDYLKDQIQVNIGSLELSASHNITQVVEVCTEYEKRDRLVKHLETVME
NKESKCLIFTGTKRVADDITKFLRQDGWPALAIHGDKQQQERDWVLNEFRQGKSPIMVAT
DVASRGIDVKGINFVINYDYPSNSEDYVHRIGRTGRAGTKGTAYTYFTEDNRKQARDLLV
ILREAKQHIDPKLEEMGGGRGGRGGWGGRGGRGGRGGRGGYRRGGYGGGGYGGGRGSDIT
GSNSAPLSNSRW*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG