YALI0E27720g

Overview

Description similar to uniprot|C4R7Q0 Komagataella pastoris Probable type-III integral membrane protein of unknown function
Locus type CDS
Locus tag YALI0E27720g

Location

Species Yarrowia lipolytica Positions 3275129..3277041
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1913 (nuc.)
Previous locus YALI0E27715g Next locus YALI0E27742g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E27720g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E27720gYALI0E27720g_mRNA-001YALI0E27720g_CDS-001

Nucleotide sequence

 

>YALI0E27720g
ATGACGATGAAACGATCGCTAAACGACATTCTGGACGGCCACGAGGATGTGGATCTCGAC
TCTACCGCCGAGCTGGATGTAGACATGGAGACCCCACCCTTCCAGGATGCCCCAGACACC
CAGATGCGAATGTGTGTGGACTGTGGAGATCAGCCAGCGGACAAGAACTGCCAGGGCTGT
GAGGAAGACTTTTGCGACGTATGTTTTCAGTACATTCACCGAACCGGCAACCGATCTAAA
CACGCTACTCTGCCCATTGAGAACGCTATCACCAACTCGGCAGGTGGCGCGACTGGAGCC
ACCACAGCGAGCAATGGAGCTGGACAAGAGCCTGAGGACAAGGTCGACATGTCTCTGTCG
AAGCACTCCATGATTGAACCCGATGAGACCCAGCTCAAGGTTCTGGCCCTGCTGAAAGAG
CGGGCTAAGGATGTTCCTGTTCGGCTCACTTATGACGAGAGAAAACTGCTCAGACTGTTG
GAGGCTGCTCTCAACGTCTCCGAGTACACCGACAAGGTCGACATTCTGTCCTACACTTCC
AAAGCCAAGCGTATTGTGGCCCAGCTCCGAGAAATGTGCTCGATTATGGCTGCTCTGGTT
GTGGCTACAGACATGAAGACTGGACAGGCACTATTTGAGAATAAGAACTTTGCTGATAAC
GCCGATTGGTTCCAGACTGTGTTTGAAATTGGCCGGCGATACAAGATCATGAACCCTGAC
AAGATGCGAGACTCTTTTGGTAAACTCATGTACATGATCATGGACTCAAGGCTGGCAGAA
GTGTCTCAGGTCATGGAGTTTGATCTCTACAAGCCTGTCAAGAGCGTCTATAGCCATCTG
CGATCATTTGGAGATGGCGCTGACGGTTCCGGCGTCGCTGTCTTTGGAGATCCTCTAATT
GTCGATGCCATCATGGAGATCAACCCTGATGGCAAGAACCGAAGACAGATTCAGCAGGCG
ATCCAGACCAAGGAGCGAGCTATCGAGATTCTGGCCAAGCGATACTCCAAGGGCAAGCTG
CTTAAGGAGGATGTTCGACAGTGTCTCTATTCTCTCGGAGATTACCATGCCTATCTCCGA
GCCAACCAGGAGCCTGTGGAGCGAATGATGAAGTACCTCAATGAAGACTTTGACGAGTCT
TCCGACACATCTGGTGAGTTCCATCTGGCTATCAGATACGGCTCTGGAGGGGCTCGTCTG
TCCCACAACCACTCAAAGCAGTACCAGTACGTCCGCCAGTCTCTGTCTTTGTGGTCCGAG
ATTATGAAGGAGATGTTCCGAATGTGGTCGCTTTCGGACGCGGACCTCACCAGCACTGGC
CGATACCAGCTCACCGACACTGGTCAGGGTCTCAACCGAATCAAGGGCTGCCCTGGTGTG
TCTCGAGCCATTCATGGTGTCATATCCAAGGCTCAGCATCGAACTGGCTCGTGGATTGGT
TCCTCAGTCGTCCACCTGGGGGATCATACTGTGCCCAACGCCCTCTTTTTCCTGGACAAG
TACCTCCAAGTGCCCCGTATTCTCATTCCCGTGGACATGGTGGTCTCCAATATCGAAAGC
CTCGCAAAGGACCCACATGTGTCCCTGTGGATAAAGGAGCAGTTTGGTTCACCTGACCGG
CTCCGGAAGACTATTCTGGCTGACTTCTTCAAGCACGCCTTTGACGGATCTGGAGCAGAC
AACTTCTACGACGCCGGCTCGTGTATCGACGGCCGACTCACCTCTGCATGGAACTGGGCC
AACTCCATTTCCAAAAAGAGCTATTACAAGATCTTCCTTGTCAGTGGCTTCACTGGGTTC
GATGGAGCTGGCTTTTAAGGAGCATGCCTCGAGTACAGCACATGGAGTGACGGCGCCTTC
GGTCATCCAACGCTCATATAGAAATAACATGTTAGAATAGTGTTGAATTGTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E27720g_CDS-001

Protein length: 606 aa.
Product: Conserved hypothetical protein

>YALI0E27720g_CDS-001 MTMKRSLNDILDGHEDVDLDSTAELDVDMETPPFQDAPDTQMRMCVDCGDQPADKNCQGC
EEDFCDVCFQYIHRTGNRSKHATLPIENAITNSAGGATGATTASNGAGQEPEDKVDMSLS
KHSMIEPDETQLKVLALLKERAKDVPVRLTYDERKLLRLLEAALNVSEYTDKVDILSYTS
KAKRIVAQLREMCSIMAALVVATDMKTGQALFENKNFADNADWFQTVFEIGRRYKIMNPD
KMRDSFGKLMYMIMDSRLAEVSQVMEFDLYKPVKSVYSHLRSFGDGADGSGVAVFGDPLI
VDAIMEINPDGKNRRQIQQAIQTKERAIEILAKRYSKGKLLKEDVRQCLYSLGDYHAYLR
ANQEPVERMMKYLNEDFDESSDTSGEFHLAIRYGSGGARLSHNHSKQYQYVRQSLSLWSE
IMKEMFRMWSLSDADLTSTGRYQLTDTGQGLNRIKGCPGVSRAIHGVISKAQHRTGSWIG
SSVVHLGDHTVPNALFFLDKYLQVPRILIPVDMVVSNIESLAKDPHVSLWIKEQFGSPDR
LRKTILADFFKHAFDGSGADNFYDAGSCIDGRLTSAWNWANSISKKSYYKIFLVSGFTGF
DGAGF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG