YALI0E27698g

Overview

Description weakly similar to uniprot|Q9HEA4 Neurospora crassa
Locus type CDS
Locus tag YALI0E27698g

Location

Species Yarrowia lipolytica Positions 3269499..3271907
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 2409 (nuc.)
Previous locus YALI0E27676g Next locus YALI0E27715g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E27698g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E27698gYALI0E27698g_mRNA-001YALI0E27698g_CDS-001

Nucleotide sequence

 

>YALI0E27698g
ATGGACTTTCTCACCAAGGCCATTGGCACCGTCTCGTCGTACGGCTCCAAGCTGCCGTTT
GTGCTGGGCGACGCGACGCAAAAGGCCAGCGAGGGCAGATCGCTATGGACGGTATATGAT
GCGACCCTCAAGTCCAATTCTTCCGACTGCACCGTGTTTGAATTTGTCGCTGACCAGACA
TATCCTCGTGACCGCATTGTTGTTGTCAAACACTTCGCACGGTCGCTCAAAACTTATCGT
TTTCCGGGTATTCTCAAGGTCCACGACACGGTTGAAACAGACACTTCGGTACACGTTGTG
ACTGAAAGATGCAGATCTCTGGCACAGGTGATCCGAGACTCCAAGGACGAGCTATCGGCC
GACCGAATTTTGTGGGGACTCTACTTTGTGACCGAAACGCTCAAACAAATCAACGCAGAA
GGAGCTTCAACTCACGGCAACATCTCTCTCGACTCCATCTTCATCACAGCTTCTGGAGAA
TGGAAGGTGGGGGGTCTGGAACTTATCACCGCCCAGAAAGACGCTCAGAGTGCTCTGGCT
TCATTTGGACCTCTTCTTCCTAACTCCTCAAACAATGCCCCTCCTGAAATCAAGAACCAA
GGATACCAGTCTGCCCAGAGCGCAGCCTCCAAGCTGGCCATTGATTCCTGGCAGTTTGGA
AACCTGCTGCAGTCTCTCTACACAGCTGTGGGTGTGGATATGCCTGCTGGAATGCCCGCC
ATGGTATCTCAGATGACCAGCGTCAAGCCTGAGAAGCGACCTCGTATCCCCAAGTTCCTG
GAACAGGCGCAGGTCTCGTTTTTCGGCGACCATGACATGATTTCCGTGTCCCAGGACATC
TCTCAGTTCCATATCATTTCCGAACCCATGGAGCGACGCCATGTGCTGGAAACACTTACA
AAATTTAGGCAGGCGTTCCCCCCTGCATACCTGGCTTCCAGCGTTATCCCCGAGCTCCTT
AGAGCTCTGACTCCACCTACACCGTCGTCATCTCAGATCAACTTGTCCAACGACCCCGGT
GTCTTCCAATCTGACTCAGAGAGACCCCAGATTCTCGTATGCATCTTGGCCCTGGCTGAG
GGACTGTCTTCCAAGGACTATGCAACTCTGGTGATCCCCACCATCGCCAAGATGTACACT
TGTCCCGATAGACCTATTCGAATGGCTCTTCTGGAGGCCCTGCCTTCTTATGCCCCCCAT
GTGTCCGAGAAGGTGGCCTCTGATCAGATTTTCCCTCAGTTTATCACCGGTTTCTCCGAT
ACATCCCCTCTCATTCGAGAGTCCACTGTAAAGGCTGTGTTGCCGCTGATTCCTCATCTT
AATTCCCGAATCAAAAACAACGATCTTCTGCGCTACCTCGCCAAGACTCACAACGACAAG
GAGCCCGGTATTCGAACGAACACCACCGTCATTCTCGGCAAGATTGCTGACGAGCTGTCT
TCCTCTGCACGAACAGGTATTCTGGTGACTGCGTTTGGTCGAGCTCTCAAGGACCCCTTC
GTACACACACGAAACGCTGCTCTTTTGGCATTGGCCTCCAACATGGACATTTTCGATGCG
TCCTCCATCGTCAACAAGGTGCTGCCTGCCATTGCTCCTAGTCTCATTGACAACGATCCT
GCTATTCGCGCTCAAGCGAAATTGACCTTTGACGAGTTTCTGGCTGAAGTTGTCAAGCAT
ACCTATAATCTGGATGATGATACCGAGATCACTGAGCCTCCTCAGTCGTCAGTTACACTC
TTGGCCACCAAACAGAAGGAGAAGGATGCATCCAAGACCGAGGCAGGCTCTGCGTGGTCT
CTTTCGTGGTCCTCTCCTTTCACATTTGGTACTAAAACCCAATCCACATCTTCCTCCACT
GCCGGAACTCCCGTGGTGGCTCAAGGCACCATCTCTCGACAGGAGTCCCCTGCTCCTATT
GTTGACGAAGTTGATTCACTGGCTTCCGCAGCCCGAACCATGTCCATCAAGCCCAAGAGC
GGTCTCTCTCTCGGCTCCACCAAGCCCAAGCTTGCTGCTAGTGGCCTAGGTATCAAAAGT
ACTCTTGCTACAAAGAAACCAGCTGCTCCTCCTACCCTGCAAGACAACGACGGCTGGGGT
CTGGATGACAACTGGGACGATGGATCTGACGGCGAGGTGGTCATCAAGGAGGCCCCCAAA
ACTAAGCCTGCTCCCAAGACCAAGAAGCCTGCCAAACTGGATCTGGATGACGATGAAGAT
GGAGATGATGATGGCTGGGACAATTGGTAGGACTAATGGTTCATATAGATGATATTGCCG
ATGACGGGAGTCCGTGAAAATAAGAGTTGAAAAGAGACTCGTGTATGTAAATCTCCACAT
TATTAATATTGGTTTGTACGCTGTTCGTTCATTTGAAAGTCAATTAATCTATACCATTTT
TTCTATGAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E27698g_CDS-001

Protein length: 750 aa.
Product: Conserved hypothetical protein

>YALI0E27698g_CDS-001 MDFLTKAIGTVSSYGSKLPFVLGDATQKASEGRSLWTVYDATLKSNSSDCTVFEFVADQT
YPRDRIVVVKHFARSLKTYRFPGILKVHDTVETDTSVHVVTERCRSLAQVIRDSKDELSA
DRILWGLYFVTETLKQINAEGASTHGNISLDSIFITASGEWKVGGLELITAQKDAQSALA
SFGPLLPNSSNNAPPEIKNQGYQSAQSAASKLAIDSWQFGNLLQSLYTAVGVDMPAGMPA
MVSQMTSVKPEKRPRIPKFLEQAQVSFFGDHDMISVSQDISQFHIISEPMERRHVLETLT
KFRQAFPPAYLASSVIPELLRALTPPTPSSSQINLSNDPGVFQSDSERPQILVCILALAE
GLSSKDYATLVIPTIAKMYTCPDRPIRMALLEALPSYAPHVSEKVASDQIFPQFITGFSD
TSPLIRESTVKAVLPLIPHLNSRIKNNDLLRYLAKTHNDKEPGIRTNTTVILGKIADELS
SSARTGILVTAFGRALKDPFVHTRNAALLALASNMDIFDASSIVNKVLPAIAPSLIDNDP
AIRAQAKLTFDEFLAEVVKHTYNLDDDTEITEPPQSSVTLLATKQKEKDASKTEAGSAWS
LSWSSPFTFGTKTQSTSSSTAGTPVVAQGTISRQESPAPIVDEVDSLASAARTMSIKPKS
GLSLGSTKPKLAASGLGIKSTLATKKPAAPPTLQDNDGWGLDDNWDDGSDGEVVIKEAPK
TKPAPKTKKPAKLDLDDDEDGDDDGWDNW*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG