YALI0E27555g

Overview

Description similar to uniprot|P39709 Saccharomyces cerevisiae YAL067c SEO1 suppressor of sulfoxyde ethionine resistance, pseudogene
Locus type CDS
Locus tag YALI0E27555g
Pseudogene This locus may contain pseudogene(s)

Location

Species Yarrowia lipolytica Positions 3250677..3252487
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1811 (nuc.)
Previous locus YALI0E27533g Next locus YALI0E27588g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E27555g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E27555gYALI0E27555g_mRNA-001YALI0E27555g_CDS-001

Nucleotide sequence

 

>YALI0E27555g
ATGGATAAAGGACGGCGGCAAAAGGATGCACTGATCCAAGGGGCGGGGGTCGATCTACAC
ATGGCTATAAGTACAAGTCTCTGCAATCGAGAACCTCTCACCCATCACATAATCGCATAT
CAACACATGAAATTTATTCCAACCATACGTCACGTCGCAGACGACTTGGCTATTGAAGCT
GTCACAGATGAACAAGAACTCGTCATAGAGTACAGAGACGAAACCAATCGCCCGTGGTGG
AAGTTCTTTGATGAGTATGAGTACAGACAGAACAGCTACGAGAAATCCGGTCATAAGTGG
TTCAAGTGGTTCGACGAACGAGATACCAAGGAGGACAAGAAATTGATTCTCAAGCTCGAT
CTCCTTTTGACATGTTACTCTCTGGCAGTCTACTGGGTCAAGTATCTAGACCAGACCAAT
GTCAACAATGCTTATGTCAGCGGTATGAGAGAAGACTTGGGTTTCAAGGGTAACGACTTG
GTCAATGTACAGGCCATGTACCTGGTGGGAGAGTTGTTTTCCAGCTTCCCTTCATGTTCA
TGCTTCCCAAAGTGCCGCTAAATATTGTCATTCCTGCCATGGATCTCTGTTGGGGTATCA
TGACTCTCTTGTGTTGCAAGATCCATTCTGTCGCAGCTCTCAAGGTGATTCGATTTTTTG
TTGGAGTTTTCGAGTCTGGATTTGTGCCAACTGCATATTTCCTCATGGGCTCGTGGTACA
AGCCATCTGAGGTCGCTCGCCGAGCAGGTTTCTTCTACATGGGCCAGTTTCTTGGTCTGC
TGAGTTCGGGTCTACTGGCTAGTGCAGCCCTTGATCTAGATGGAGTTGGAGGATTTGAGG
GGTGGAGATGGGTGTTCATCGTGGACGCCATTGCAACTCTTCCACTGGCTGTCATTGGCT
TCTTTGTCATTCCAGGAACCCCAGACAAATGTGTTTCGCTGTTTTTGACGGACGATGAAA
TCCGAAGATGTCGACTAAGAATGAAACCATATGCTACCGAAACTACCGCGGTGGAGAAGA
AGAAGTTCTTCTCTTGGGAGCTCTGGAAACCTCTCCTCACTACCTGGCGCATGCCACTAC
TGGTACTGGTGGCCTGCATATTCTTCAACAACAATAGTGGAACATCTGGTTCTTTCATCC
TCTGGCTGAAAAGTCTTACGGACTCGGAAGGAAACCAGAGATACACAAACCAGAAGATTA
ACCAGTTGTCGTCTGTGGCACCAGGTCTTGGTTTTGTGTACGTCTACTCGGCATCTCTTT
TTGCAGACATGTTCAAATGTCGATGGGGAGCCATTGCCATCACCCAGACCCTCAACTTCA
TAGGCTGCGTGATTCTGGCAGTATGGGACGTGTCGGAAGCTGCAAAGTGGTTTGCCTTCT
GTCTACAATACACGTCCTGGTCCATGAGTCCATCCTACTTCGGCTGGGTTAGTGACATTA
TGAGACACGATCCACAGGCATATGCCATTGTGATTGTGGCCATGAATATGATGGGCCAGT
CCACCCAGGCATGGGTGTCTGTTCTGGTTTTCCCCACTGAGGAATCACCTCGATTTACCA
AGGGTTTCGCAACTTGTGCTGCCTGTGCCTTCGGTTGCGTTGTTGGAGGTATTGCGGTTC
TTTATTTCTACAAGCGAGATGAGAAGCGAATCTGCCACAAGAACGGCATCATTCTAGTTG
GCTCCGCCGTGGAGTGTATCGAAGCCGAGAAGGACAACACCACCGACAGGAAGGAGAGTA
TCAAGGGAGACGACATCAAGGTGGACGATATCAGAGTCTCTGCCTCGTCCGAAAGTGTCA
ACTATCAGTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E27555g_CDS-001

Protein length: 603 aa.
Product: Permease, putative

>YALI0E27555g_CDS-001 MDKGRRQKDALIQGAGVDLHMAISTSLCNREPLTHHIIAYQHMKFIPTIRHVADDLAIEA
VTDEQELVIEYRDETNRPWWKFFDEYEYRQNSYEKSGHKWFKWFDERDTKEDKKLILKLD
LLLTCYSLAVYWVKYLDQTNVNNAYVSGMREDLGFKGNDLVNVQAMYLVGELFSSFPMFM
LPKVPLNIVIPAMDLCWGIMTLLCCKIHSVAALKVIRFFVGVFESGFVPTAYFLMGSWYK
PSEVARRAGFFYMGQFLGLLSSGLLASAALDLDGVGGFEGWRWVFIVDAIATLPLAVIGF
FVIPGTPDKCVSLFLTDDEIRRCRLRMKPYATETTAVEKKKFFSWELWKPLLTTWRMPLL
VLVACIFFNNNSGTSGSFILWLKSLTDSEGNQRYTNQKINQLSSVAPGLGFVYVYSASLF
ADMFKCRWGAIAITQTLNFIGCVILAVWDVSEAAKWFAFCLQYTSWSMSPSYFGWVSDIM
RHDPQAYAIVIVAMNMMGQSTQAWVSVLVFPTEESPRFTKGFATCAACAFGCVVGGIAVL
YFYKRDEKRICHKNGIILVGSAVECIEAEKDNTTDRKESIKGDDIKVDDIRVSASSESVN
YQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG