YALI0E27588g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0E27588g

Location

Species Yarrowia lipolytica Positions 3253602..3254765
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1164 (nuc.)
Previous locus YALI0E27555g Next locus YALI0E27610r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E27588g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E27588gYALI0E27588g_mRNA-001YALI0E27588g_CDS-001

Nucleotide sequence

 

>YALI0E27588g
ATGGTTCCTCTTCTTTACCTCGCTCTGCGATGCCCCTCCTCCGCCTCTGAAAGCCGTCTC
AGATTCGCTTACAGAAACCGATGCGTCGAGCTGCTGCAGTCCCCCCAGGGGCGTGAAACT
TTCGACTGCATGTCCTACGCTTACCAAATTCTCGTCAATTCCCCATTGAGAGACCAATAC
GACGAGGCCGACGAGCGAGACAGTGTCGAGTTTCTCACTGATCTCGTTGAGCAGAATGGA
GGTGTTGTCGAGCCCACCGAATACTTCATGCAGCAATGGGGTCTTCTTGGAACAGATCGA
TCGGAAGAGACTTTCATTTTTAACAAGTTCTCAGAGCAGAAGGGTTGGGAACTTGAACAA
AACTTCCTACCTACAGCCGATACTGGTATATTCAAGCGTGTCTTCCCCACTAAGCATGTT
CCTGCAATTGAGCTACATCTGGTTAAGTTGATGGACCCTTCTTTCCTGTCCAACGTTATT
GCCTCCGACGAAAGCCTGCATTCTTTCTTTGAAGAGTCCAAGGTTGATTTCTCAGCTCCT
TTTGCAGCAGAGTTTCTTTACCTGCTGCAGAATGAGCTGGTTGAGAGCCTTCACCCTCCT
CCTACCAGCAAGGAGGTGGGCGTCAAGCACCTCCATGTCACTGTTCCCCAGAAGAAGCAC
AAGTTCAAGGGTCCAGAGCTGCACTACTATGCTGCTGCCAAGCGAGCAGAGCTGGCCGAG
ACCTGGTTCCTCAAGTCGTGTCAGAACAAGAACATTCCCAAGACCACTTACATGCATATT
TTGTATTATGTGGTTGCATGTGAGCTTCTGGGAAAGTTGGCTGCCCAGTGGCACAATGCC
GTGAAGTCTCATCTCTCCCAATCTGACCGCCTGGACGCTCTGTTGACCCAGCTCGATGCA
AAGACAAATGAGTGGCTCGTGGAAGATGTGAACTCACTGTCGGAGAACATTGCCAAGACT
GGAGAGAACGAGTACAACCAGAACTTCTTCATCGACTCCGCCTACAACGGCTTCACATAC
ACAGAGCCTGCTAACCTGCCATTGCATGAGAGCCTCAGACTCTCAGAGTACAAGAATGAA
CGAGGAAATGGTATGTGGACCGAGCGGGGTTTCTTCAAAGATCTCCAGTTCCCCTTCCGA
AACGAGTACTATCGACTGTGGTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E27588g_CDS-001

Protein length: 388 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0E27588g_CDS-001 MVPLLYLALRCPSSASESRLRFAYRNRCVELLQSPQGRETFDCMSYAYQILVNSPLRDQY
DEADERDSVEFLTDLVEQNGGVVEPTEYFMQQWGLLGTDRSEETFIFNKFSEQKGWELEQ
NFLPTADTGIFKRVFPTKHVPAIELHLVKLMDPSFLSNVIASDESLHSFFEESKVDFSAP
FAAEFLYLLQNELVESLHPPPTSKEVGVKHLHVTVPQKKHKFKGPELHYYAAAKRAELAE
TWFLKSCQNKNIPKTTYMHILYYVVACELLGKLAAQWHNAVKSHLSQSDRLDALLTQLDA
KTNEWLVEDVNSLSENIAKTGENEYNQNFFIDSAYNGFTYTEPANLPLHESLRLSEYKNE
RGNGMWTERGFFKDLQFPFRNEYYRLW*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG