YALI0E27533g

Overview

Description weakly similar to uniprot|W9YBS0 Capronia epimyces hypothetical protein A1O3_04073
Locus type CDS
Locus tag YALI0E27533g

Location

Species Yarrowia lipolytica Positions 3249283..3250400
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1118 (nuc.)
Previous locus YALI0E27511g Next locus YALI0E27555g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E27533g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E27533gYALI0E27533g_mRNA-001YALI0E27533g_CDS-001

Nucleotide sequence

 

>YALI0E27533g
ATGTTCCGACCAACCCGACTACCCCGAATCCAGCTTCTGAAGCCACTCTTCTCTAGGCGC
TTTCTCAGCTACACAATCGCCGAGGCCTACAGCGCGAAGCCCCGGCCACCTCACCAGCAG
TCCAAACCTCCGGCTGGAGAAAACAGACCGCCTACCGGAGAAGATGCATTTTTCCATGTT
TCGCTGAGCAAGACGGACTCGCCCGATTCATACACATACAGCAACACGGCGTTTGGCGTC
ACCGACGGCGTGGGCGGCTGGGCAGAAATGGGAGTCAATTCCTCCGATTTCAGCTACTAC
CTATGCCACGAGAGCTCCAATCTGGCTGTGGAGAAGGCTAAGGAGATCGAGAAGGAGCCT
GCATTCGCTGAAAAGCCCCTAGCCTCACTCATTTCCCCCAAACAGCTGCTCACCAACGCC
TACAACAAGATTGTCCGGGAAAAGACCGTCAAGGCAGGAGGAAGCACAGCATGCATTGGG
GTCGCTGGTCAGGACGGCCAGGTGGCTGTTGCCAACCTCGGAGACTCCGGATTCATGGTT
TTCCGTAACGGCAAGCTTGCTGGAGGCTCGAAAGCGCAGACTCATGCCTTCAACACCCCT
TACCAGCTGGCTATCATCCCTGATGAACTCAAGCGAAGTGATGAACGACAGGGTCTGCGT
CACATTGAGGACACTCCCGCAATGGCCGATCAGTTCTCTTTCACTGCCGAGCCTGGGGAT
GTCATTGTGCTTGCTACTGACGGTCTCACCGACAACATGAGCGCTCAGGACACCCTCAAG
ATTGTCAACGAAACCATGCTGGAGCACGGATCGTGGATCAAGGACGACAAGGAGGGCATC
AAGTCCAGCGGTGAACACAAGGGTGCCATGGATCTAGCGCGGCGAATCGTGCTAAAGGCC
AAGTCGCTAAGCACCAATAAGCAGCATCTTTCTCCGTTTGCCAAGGAGGTGCAGCAGGTG
ATGAAAGTGCACTACATGGGAGGCAAGCCCGACGATATCACAGTGCTTGTTGTTATTGTC
AATGAATAAAAAGACTCTGCCTAAATCAGTCAGGCGGACATTCACATTGCATACGGTATA
CATAGCTGCAAAAATACATAATTTGGGCATTGGATTAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E27533g_CDS-001

Protein length: 343 aa.
Product: Conserved hypothetical protein

>YALI0E27533g_CDS-001 MFRPTRLPRIQLLKPLFSRRFLSYTIAEAYSAKPRPPHQQSKPPAGENRPPTGEDAFFHV
SLSKTDSPDSYTYSNTAFGVTDGVGGWAEMGVNSSDFSYYLCHESSNLAVEKAKEIEKEP
AFAEKPLASLISPKQLLTNAYNKIVREKTVKAGGSTACIGVAGQDGQVAVANLGDSGFMV
FRNGKLAGGSKAQTHAFNTPYQLAIIPDELKRSDERQGLRHIEDTPAMADQFSFTAEPGD
VIVLATDGLTDNMSAQDTLKIVNETMLEHGSWIKDDKEGIKSSGEHKGAMDLARRIVLKA
KSLSTNKQHLSPFAKEVQQVMKVHYMGGKPDDITVLVVIVNE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG