YALI0E27247g

Overview

Description similar to uniprot|P53322 Saccharomyces cerevisiae YGR260w TNA1 similarity to allantoate transport protein
Locus type CDS
Locus tag YALI0E27247g

Location

Species Yarrowia lipolytica Positions 3228382..3229950
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1569 (nuc.)
Previous locus YALI0E27225g Next locus YALI0E27269g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E27247g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E27247gYALI0E27247g_mRNA-001YALI0E27247g_CDS-001

Nucleotide sequence

 

>YALI0E27247g
ATGGAGACCAAAGACTCAAACACCCACATTGAATCTGTGGAGAAGCTCAATGACGCCGTA
ACCAGCGTCGAGTACCTGCCATCCCTGGAGGAGAAGTTCCCCCATGTCGACGGAGCCAAG
CTCCTGCGAAAGATGGACCTGAAGATTGTCCCTATGGTCACTCTGCTCTATCTCATGTCT
TTCCTCGATCGAGGTAACATTGGAAATGCCAACATTGAAGGTCTCTCCGAGGACTTGGGA
CTCACCGGCCAGCAATTCAATCTCTGTCTCACCGTGTTTTTCTTTACCTACTGCACCTTT
GAGGTGCCCTCCAACATGATTCTCAAGCGACTCAGACCCTCTGTCTACCTACCTATCATT
ATGGTTTGCTGGGGAACCTGTATGACACTCATGGGCATTGTCACCAACTATCACGGTCTT
CTCATCTGCCGACTCTTTCTGGGAATGACTGAGGCTGGACTTGTTCCTGGTGTTGCTTAC
TACCTCACAATGTGGTATGCTCGTAAGGAGATGCAGCTGCGACAGGCTCTTTTCTTCTCA
GCTGCCGGTATGGCTGGTGCCTTTTCGGGTCTTCTGGCCTTCGCTATTGCCAAGATGAGA
GGAACAGCCGGTCTGGCTGGCTGGAAGTGGATCTTCATCATTGAGGGTATCGCCACCGTT
GTTGTCGCTGTCATTGCCTTCTTCACTATCCAAGATTTCCCCGAAGACGCCAAGTTCCTT
TCTGAAGAGGAACGAGAGTACCTCCAGTACAAGCTCAAGTACGACGGTCTGGATCGAGAC
TCAGCAGCTGCTGCCACCGGCGTCCATCAGTCTATGGGTGTCAACAACTCTAACGATAAA
AAGTTTGTGTGGCAGGCTTTCCTGGATCCCCAGTCCTGGGCCATTGCCTTCCTAATTATC
TTTGCTGCTACTCCCATCTACTCGATTTCTTTCTTCCTGCCTTCCATCATCAAGAACCTG
GGTCACGTCTCTTCCAAGGCCCAGCTCATGTCTATTCCCGTTTCCTTCACTGGTGCCATC
ACCACTGTGGTGCAGGCATACTTCTCAGACAAGTACGGAATCAGATACCCTCTCATGGCT
TTGGACTTTGTGTCTGCAATTATTGGATACATCATGGCTCTTACCACTGCTGAATCTCAC
CCGGCGGTGACATACGCGGGATGTTTCTTTATCGTTGGAGGAACCCACCCTGCCTTTATT
GCTATGTTATCTTGGCTCTCTGTCAACAGTGCCGGAACCTACAAGCGAGCCATTGCTCTC
GCTATCGCTCTCATGCTTGGTAATATGTCTGGAGCTGTAGGTGCCAACATTTACCGAGCC
CAGGACCGACCAGGGTACAAGCTTGGACACGCTATTAACCTTGCCTTTGTATCTGCTGGT
CTGACTCTTGCTACCATTACCTACCTCTGCTACCGAGCTGCCAACCGACGGCGAAGAGAG
GGTCTGGCTGCTGGTAAGTACGACCATCTGACCAACGAGGAGATCCACGACATGGGCGAT
CGATCTCCTTACTTCACCTACCAGTTGTAGTTTATATAAGTTATATTGATTGAATCCTTG
GCTCTTTTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E27247g_CDS-001

Protein length: 510 aa.
Product: High-affinity nicotinic acid plasma membrane permease, putative

>YALI0E27247g_CDS-001 METKDSNTHIESVEKLNDAVTSVEYLPSLEEKFPHVDGAKLLRKMDLKIVPMVTLLYLMS
FLDRGNIGNANIEGLSEDLGLTGQQFNLCLTVFFFTYCTFEVPSNMILKRLRPSVYLPII
MVCWGTCMTLMGIVTNYHGLLICRLFLGMTEAGLVPGVAYYLTMWYARKEMQLRQALFFS
AAGMAGAFSGLLAFAIAKMRGTAGLAGWKWIFIIEGIATVVVAVIAFFTIQDFPEDAKFL
SEEEREYLQYKLKYDGLDRDSAAAATGVHQSMGVNNSNDKKFVWQAFLDPQSWAIAFLII
FAATPIYSISFFLPSIIKNLGHVSSKAQLMSIPVSFTGAITTVVQAYFSDKYGIRYPLMA
LDFVSAIIGYIMALTTAESHPAVTYAGCFFIVGGTHPAFIAMLSWLSVNSAGTYKRAIAL
AIALMLGNMSGAVGANIYRAQDRPGYKLGHAINLAFVSAGLTLATITYLCYRAANRRRRE
GLAAGKYDHLTNEEIHDMGDRSPYFTYQL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG