YALI0E27269g

Overview

Description weakly similar to uniprot|P12954 Saccharomyces cerevisiae YJL092w HPR5 ATP-dependent DNA helicase
Locus type CDS
Locus tag YALI0E27269g

Location

Species Yarrowia lipolytica Positions 3232739..3235418
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 2680 (nuc.)
Previous locus YALI0E27247g Next locus YALI0E27291g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E27269g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E27269gYALI0E27269g_mRNA-001YALI0E27269g_CDS-001

Nucleotide sequence

 

>YALI0E27269g
ATGCTTAATCTGATTCGTGGAAACCTCAACGCGGCCCAATACCGAGCTGCGTCGTTTCGC
AAGGATGCCGTGCTCCAGATCGTGGCGGGACCCGGTACCGGCAAAACCAAGACGCTGGTG
AGCCGAGTAGCTCATCTACTAGAACAAGGTGTGCCCGCTCGAGGAATTGTGGTGACGACC
TTCACAAACAAGGCCGCTGACGAGCTGAAAGAACGACTGGGGGCTCTGCTAGCAGACTCG
AAGACAAACTTTTCGCTAGTCAAGGCAGGCACGTTTCATTCCATCTGTTATAAACTGTTA
CAGAAGCATGGGGATAAGGTAGGACTGCGGCCCAAGTTTGGAGTGGCTGACGACGCTCAG
CAAGTGGCACATTTGAAGAGGGTCCAGAAGCAGCTGAAGACAATGGAGAAACAAAAGAAG
GGCAAGAAGACGGAGGCAGATGAGGAGGAACCAGACACGTTGTCAAAATCAGGATCAGGA
TCGGAGTCTGAATTCTCATCGCTGTACTCGCCGTTCAAGATGAAGAGTTACATTTCAGAG
CTCAAGGTAAACATGACTTCGGATGACTCAGACGACGCTCTCCGACTTTATCAAAAACAA
CTGGAAATGTCTAACCACATTGATTTCGACGACATTCTCACCAAGACAGCCGAACTGATC
AGGAAGCACCCAGAGGTGGTCTCAGAGGTTGAGACAGTCCTGGTAGACGAGTTCCAAGAC
ACAAACAAGATCCAGATGGAACTAGTGGACCTGTTCTCTCGTCACACACCGCAAAGATCA
ATCACAGTCATTGGAGACCCCGACCAAAGTATCTACAAATTCCGATTTGCTACAGAAAGG
AACTTTCAGGAGATGAGAGACATGTACCCAGACACAGAGGTCGTGTTTCTGACAGAAAAT
TACAGATCTACAGACCCAATCCTGGCTATAGCAGAAGAGGTTATTTCACAAGACGCATCG
CGATACGGCGGGTGTGGACAATCACGCAAGCTGGTGGGTCATTCAGACTTTGCTGTCACT
CCCGAGCTAACCAAGTACGCCAACAAGTATAAGGAAGCAGTTGGAGTAGCCGAGACAATT
CGGGACTTGCGAAAGGTGACAAAGAATAGGCTGCCTCTCAGCTCTATTGCAATCCTATGT
CGTACCAATAGACAGGCTTCCATGTTCGAGGAAGCTCTAGTGGCTGGTAACACGGCCTGT
TATCTTGCTGAAGGAGGAGCCAATTTTTGGGACAAATCGCATATTCGTATTGTGTTAAAC
TACCTACGATGTGCTTACTCAGATGAGGATCGATCGGCTTTTATGGAAGCTATGAACAAC
CCTCGTCGAAGGCTCTCAGGTAAGACTGCCATGTTGATCTCACAGTATTTAGATGACAAC
TACGGAGGTCCAAACTCAGTGTATGATCTTTTACACGATGCTGCCCATCGAAAGGGTCTG
CTAAATATCACCCAGCCTTCTTTCGAGGGTCTTCGACAGTTTATGGACCATATTGATCAT
CTCAGGGACCTTATCAACAGCAAGGAGTATTACATGGATGAGGTTATTGAGTATCTTCTG
GACAAAGTGGGACTGGATGAATACATTACTACAATGGGAGTTCGTGAAAAGGCATACGAG
CGTCTTTCTGAAGTTGGTCAGATCTCTGATCGGTTTTCTGTCATCACTGAGGCTGCAGAC
AATAATCTGTGGGACAATGAGGTATCTGGAGATATCAGTGAGCAGTTATCACCCCTAGGA
CAGTTTCTCAACGCACAGGCTCTCCGGGCTGATAACTCTGGTAACGCAGAGAATGGTGTT
ATCATTTCCACCATCCATAGGGCCAAGGGTCTCGAATGGCCAGTTGTGTTCGTCCCTAAT
CTTCTCGACGGCGATCTTCCCATGCGGATGCCCGACACTGATATCGACGAGGAGAGACGA
CTTTTCTTCGTTGCACTGACACGTGCCAAGCGTCTGTTGTACATGTCGTACTCGCGTGAA
GGTGAGCCCAGTACTTTCATTACCGAAAATGTGTCTGCTCTCACATCTACTCCGACTTGG
ACCACTGAGTCTGTCAACATGCTTCTCGGTTCGCTGGGTCTGGAAGAAATTGATGAGATG
GGTAGCAAGTCCAAGACTAATGCCACCCCACCTGGGGGCTTCTCTGGGTTCACCACGGCC
TCTCAGTTGCTGAAGGATAAGGCCAAGCAGTCCATCACTCGATCTGCAGGCTTCAAGCGC
ACTTCTGAGTTGGATTCTGAGCTACCTGCAACCAAAAAGATGTCTCCGGTTGCAGCCGCT
TCGATAAAATCCACGACTAAACGCAAATCGAATGCCAAAGGCAAGGCCCAAAGCAGCATT
TTCAGCTTCACAAAGAATTCTACTGTCCCTCCAGCTCCTGAAGATCGTAAGGGTCACAGT
GAGCTGTTGAAGACGCTACCCAAAGGGACAGAAATCAAATACAGAGAGAAAGTGGAGAAA
TAAGAGCGACACCCGTTCCACTCACATGGTCACATGGTCACATGGTTAGCAACTATAGAA
AATTCCCGCAACGGGGCATAGCATATTCCTCAAGGGGTTGCCTCCAATTTTGGCCACTCA
ACAAAACAGAGATTGTGGCAGTGGAGAGGGGCAACCAGTACGAATCCGTCATTAATTTGT
AAATAGCATGTATACGAATACAAGTACCACGTTTTATGAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E27269g_CDS-001

Protein length: 821 aa.
Product: Conserved hypothetical protein

>YALI0E27269g_CDS-001 MLNLIRGNLNAAQYRAASFRKDAVLQIVAGPGTGKTKTLVSRVAHLLEQGVPARGIVVTT
FTNKAADELKERLGALLADSKTNFSLVKAGTFHSICYKLLQKHGDKVGLRPKFGVADDAQ
QVAHLKRVQKQLKTMEKQKKGKKTEADEEEPDTLSKSGSGSESEFSSLYSPFKMKSYISE
LKVNMTSDDSDDALRLYQKQLEMSNHIDFDDILTKTAELIRKHPEVVSEVETVLVDEFQD
TNKIQMELVDLFSRHTPQRSITVIGDPDQSIYKFRFATERNFQEMRDMYPDTEVVFLTEN
YRSTDPILAIAEEVISQDASRYGGCGQSRKLVGHSDFAVTPELTKYANKYKEAVGVAETI
RDLRKVTKNRLPLSSIAILCRTNRQASMFEEALVAGNTACYLAEGGANFWDKSHIRIVLN
YLRCAYSDEDRSAFMEAMNNPRRRLSGKTAMLISQYLDDNYGGPNSVYDLLHDAAHRKGL
LNITQPSFEGLRQFMDHIDHLRDLINSKEYYMDEVIEYLLDKVGLDEYITTMGVREKAYE
RLSEVGQISDRFSVITEAADNNLWDNEVSGDISEQLSPLGQFLNAQALRADNSGNAENGV
IISTIHRAKGLEWPVVFVPNLLDGDLPMRMPDTDIDEERRLFFVALTRAKRLLYMSYSRE
GEPSTFITENVSALTSTPTWTTESVNMLLGSLGLEEIDEMGSKSKTNATPPGGFSGFTTA
SQLLKDKAKQSITRSAGFKRTSELDSELPATKKMSPVAAASIKSTTKRKSNAKGKAQSSI
FSFTKNSTVPPAPEDRKGHSELLKTLPKGTEIKYREKVEK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG