YALI0E26983g

Overview

Description similar to uniprot|P38318 Saccharomyces cerevisiae YBR220c Conserved protein of unknown function
Locus type CDS
Locus tag YALI0E26983g

Location

Species Yarrowia lipolytica Positions 3197805..3199496
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1692 (nuc.)
Previous locus YALI0E26961g Next locus YALI0E27005g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E26983g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E26983gYALI0E26983g_mRNA-001YALI0E26983g_CDS-001

Nucleotide sequence

 

>YALI0E26983g
ATGGACAAAAACATCGAAATGATGCACCGGAAACGGGCCAAGGATGTTGATCAGGGCCTC
CCTGTGTCAGCATCCAATTGGGCGGAGGTAGCTACCGACGAAATTGGCGAAGTCGCAGCT
CAAAACTACACCTCTACTACACACGACCGAAAGACGCTATCCTTCTCTCAGTTGACACCT
AAGGATCGCCAGCGATTTCTTGTTCTCGTGCTGCTCTATCTGCTCCAGGGTATCCCTCTT
GGTCTCGCTATGGGTAGTGTTCCCTATCTGCTGAAGGAACATCTGTCTTATGGTGAAATC
GGAATCTTCTCCCTAGCCTCCTACCCCTACTCGCTAAAGTTGCTGTGGAGTCCAATTGTC
GATGCCTGCTACAACAAGTCGTTTGGACGGAGAAAGTCGTGGATTGTACCAATCCAGGCT
GTCTCTGGACTCGTGCTGATCTGGCTGGGGACCTTCATTGAGAAACTCATTATGGGAGGG
ATCAATGAACCTGGGTCCCAGCCCGTGGAAAAGAACTTGTTCAGAATCACACTCTTCTTC
CTTCTGCTGGTGTTCCTTTGTGCCACCCAAGATATTGCTGTGGACGGATGGGCTCTGACT
CTGTTGTCGAAGGAGGCTCTTTCCTACGCTTCTACTGCCCAGACTATCGGTCTCAACACT
GGCTATTTTACCTCTTTCACTGTGTTTCTGGCTTTCAATGGTCCTGATCTAGCCAACAAG
TACTGGCGATCTGTGCCCTCAGCTGACCCTCCCATCTCTCTGTCTGGATACCTCACTCTC
TGGGGACTCATCTACCTGGCTGTGACAGTTTGTGTCGCCCTTTTCCAGAAGGAAGACCGA
GAAAAGCACGACGACGACTCCCTAGTTACGATCTACCGGACCATGATGAAGGTGCTCAAG
CTTCCCAACATCCAGATCTTTATTCTTGTCCATTTTCTGTCAAAGATTGGTTTCCAGGCC
AACGAGGCAGTCACCAACTTGAAGTTGCTCGAGAAGGGATTCTCCAAGGGCGAGCTCGCA
TTGACGGTTCTTATCGACTTCCCCTTTCAAATTATCTTTGGGTACTACGGAGGCAAGTGG
TCCACTGGTAAAGAACCCCTCAAGCCCTGGATGATGGCATTTGTAGGCCGTCTGGGATGT
GGAGTACTTGCCATGCTCGTGGTCTACATGTTCCCTACTGAGCGAGCCAAGTCCGGAGAA
GGTATTGGATTTGGATACTTCATGGTCGTCATCATCATGCATGTTCTCAACTCCTTCCTC
AGCACCATCCAGTTCATCTCTATTACTGCCTTCCATACCCAGATTGCTGACCCTGTCATC
GGAGGCACCTACATGACCACCCTTAACACAATTTCCAACCTGGGCGGTCTCTGGCCAAAG
ATTATTGTTCTCAAGGCTGTCGACTGGTTCACATCCGCCACCTGTACACCCAAGGCTGGC
AAGACCTTCGCTGCCTTCTCATGTGTGGCCAAGGAGGCCAAGAACATGTGTGAGCAGAGT
GGAGGTATCTGCACCATCCAAACCGATGGCTACTACATCACCTCGATGCTGTGCATCACC
ATTGGAGCCACGCTGTTCTTTGGATGGATTTACAAGAAAATGCGCTTCCTTGAGTCGCTC
CCTATTTCAAGCTGGAGAGTTTGAGGCTGTATATAGATACATTAGACGAATAAAATATGA
AAGATAAATGTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E26983g_CDS-001

Protein length: 548 aa.
Product: Conserved hypothetical protein

>YALI0E26983g_CDS-001 MDKNIEMMHRKRAKDVDQGLPVSASNWAEVATDEIGEVAAQNYTSTTHDRKTLSFSQLTP
KDRQRFLVLVLLYLLQGIPLGLAMGSVPYLLKEHLSYGEIGIFSLASYPYSLKLLWSPIV
DACYNKSFGRRKSWIVPIQAVSGLVLIWLGTFIEKLIMGGINEPGSQPVEKNLFRITLFF
LLLVFLCATQDIAVDGWALTLLSKEALSYASTAQTIGLNTGYFTSFTVFLAFNGPDLANK
YWRSVPSADPPISLSGYLTLWGLIYLAVTVCVALFQKEDREKHDDDSLVTIYRTMMKVLK
LPNIQIFILVHFLSKIGFQANEAVTNLKLLEKGFSKGELALTVLIDFPFQIIFGYYGGKW
STGKEPLKPWMMAFVGRLGCGVLAMLVVYMFPTERAKSGEGIGFGYFMVVIIMHVLNSFL
STIQFISITAFHTQIADPVIGGTYMTTLNTISNLGGLWPKIIVLKAVDWFTSATCTPKAG
KTFAAFSCVAKEAKNMCEQSGGICTIQTDGYYITSMLCITIGATLFFGWIYKKMRFLESL
PISSWRV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG