YALI0E26961g

Overview

Description highly similar to uniprot|P02557 Saccharomyces cerevisiae YFL037w TUB2 beta-tubulin
Locus type CDS
Locus tag YALI0E26961g

Location

Species Yarrowia lipolytica Positions 3195605..3197005
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1401 (nuc.)
Previous locus YALI0E26939g Next locus YALI0E26983g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E26961g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E26961gYALI0E26961g_mRNA-001YALI0E26961g_CDS-001

Nucleotide sequence

 

>YALI0E26961g
ATGCGAGAAATCGTTTCCCTCCAATGCGGACAAGCCGGAAACCAGGTCGCAACTGCCTTT
TGGAACACAATCACCGAGGAACATTGTCTGGACGACGATGGGTTCTTTGTAGGCGACAAC
CGAGAGCAGAGTGACCGACTTGAGGTCTTCTTTTCCGAGGCTTCCAACAGAAAGTATGTA
CCTCGAGCTGTCGCTGTCGACCTCGAGCCTGCCACTCTAGACTCCATCAGATCTGGCAAA
CAGGGCCATCTGTTCCGACCAGACAATCTAATTAGCGGACAGTCAGGAGCAGGCAACATT
TGGGCAAAGGGATACTACACAGAAGGAGCTGAGTTGATGGAGACGGTAATGGACGCGGTG
CGACGCGAGGCAGAGTCATGCGACGCCCTTCAGGGATTCCAGGTAACCCACTCTCTGGGA
GGAGGAACCGGTTCAGGAATGGGCACTCTTTTGCTGTCGAAAATCAAGGAGGAATATCCC
GAGCGCATGCTGGCCACGTACTCGGTTCTTCCCTCACCTAAGGTCTCCGAGACCGTCACT
GAGCCCTATAATGCTGTGCTCTCTTTCCACCAGCTCGTTGAGCAGGCAGATGCTACCTTC
TGTCTGGACAATGAAGCTCTGTACGATATCTCCACACGAACTCTCAAGATTAAACAACCC
CGGATCCAGGACCTCAACAACCTCATCTCCAAGGTCATGTCGGGCGTGACCACTTGTCTG
CGATTCCCGGGCCAGCTGAACGGAGACCTTCGAAAGATGGCTGTCAACCTGGTGCCCTTC
CCCCGACTCCATTTCTTTACAGTCGGCTACGCTCCGCTTTTTTCGGCAGCCTCACAGTCG
TTCCAGCAACTCGAGGTTCCCGAGCTGACCCAACAGCTCTTCAACCCCAACAATGTCATG
GCTGCTTGTAATCTGTACAATGGCCGGTACTTGACGGTGTCCACCATTTTCCGAGGAAAG
GTGTCGACCAAGGAGGTCGAGGACTCTATCCAGACCGCTCGAACCAAACACTCACCCTAC
TTCGTCGAGTGGATTCCCAACAACATCCAGACGTCGGTCTGCAATGTGCCTCCCAAGGGG
CTCAAGACCTCTGCTACTTTTGTGGCAAATTCCACTGCAGTGCAAGAGCTCTTTACCCGA
ACCGCAAGCCAGTTTTCGGCTATGTTCCGACGAAAAGCTTTCATCCACTGGTACACTGCT
GAAGGTATGGAACTGATGGAGTTCACCGAGGCCGAGTCCAACCTGCACGATCTCATTGCT
GAATATCAGCAATACCAGGAGGCTGGTGTGGATGACGATCTCGGATACGAAGAGGGAGAG
TATGTTGAGGAGGAGTATCTGGAATAATTCTGCAGACTATCCCTCTGCATTTTGTATAGC
TAATGTAATATTTATGACTAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E26961g_CDS-001

Protein length: 449 aa.
Product: Beta-tubulin, putative

>YALI0E26961g_CDS-001 MREIVSLQCGQAGNQVATAFWNTITEEHCLDDDGFFVGDNREQSDRLEVFFSEASNRKYV
PRAVAVDLEPATLDSIRSGKQGHLFRPDNLISGQSGAGNIWAKGYYTEGAELMETVMDAV
RREAESCDALQGFQVTHSLGGGTGSGMGTLLLSKIKEEYPERMLATYSVLPSPKVSETVT
EPYNAVLSFHQLVEQADATFCLDNEALYDISTRTLKIKQPRIQDLNNLISKVMSGVTTCL
RFPGQLNGDLRKMAVNLVPFPRLHFFTVGYAPLFSAASQSFQQLEVPELTQQLFNPNNVM
AACNLYNGRYLTVSTIFRGKVSTKEVEDSIQTARTKHSPYFVEWIPNNIQTSVCNVPPKG
LKTSATFVANSTAVQELFTRTASQFSAMFRRKAFIHWYTAEGMELMEFTEAESNLHDLIA
EYQQYQEAGVDDDLGYEEGEYVEEEYLE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG