YALI0E26895g

Overview

Description some similarities with uniprot| E9D8R5 Coccidioides posadasii glucosidase 2 subunit beta
Locus type CDS
Locus tag YALI0E26895g

Location

Species Yarrowia lipolytica Positions 3188547..3189903
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1357 (nuc.)
Previous locus YALI0E26873g Next locus YALI0E26917g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E26895g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E26895gYALI0E26895g_mRNA-001YALI0E26895g_CDS-001

Nucleotide sequence

 

>YALI0E26895g
ATGAAAATCTCGGCTATCTTCGCGCTGGGAGCTGCCTCTGCCGCCATGGCGCTTAAGGGC
GTGGCTCCTGAAGATGAGCATCTCTACAAGATCTCCAATGGAATTTGGAAGTGTCTCAAC
CACCCCCACATCCGTCTGGAAGCCCACCAGCTCAACGACGACTACTGCGACTGTCCGGAT
GGCAGCGACGAGCCCGGAACCGCTGCCTGTGTCGGAATCAAGGACTACGATATTCGAAAG
AAGCTCACATTTTACTGTGCTAACAAGGGTCATATTCCAGGACGACTTCCTTCCAACAGA
GTAGGAGATGGTATCTGTGATTCCGACATTTGCTGCGACGGCTCCGACGAGGATGACGGC
ATCTGCCCCAACGTGTGTGCCGAGATGGCAGCCGAGCGAATCACCAAGGAGAACGAGCTC
AAGAAGACTCTTAGTGAGGGTCTCAATGCTCGACAGAAGCTGCTGGGACGACTGGGAGCT
ATCCAGAAGACCACAAAGGAGGAGGAGAGCGCCATTATTGAGAAGATTTACGACATAAAT
GTCGGAATCAAGGAGGCCGAGAAGAAGCTGGCCGCTGAGATCGAGAAGGCCAAGGAGGAC
TTTGGATACGAGGCCCCCAAGCCCGAGCAGTCCCCCCTCGAGAAGCTCACCAATTTCCTC
GGTCCCGAAATCCAGCAGAAAATCATGGGCTTTGCTACCGATGCTCGAATGTGGATGGTT
GCTAACGGTCTCATGCCTCACCCTGACCATACCAAGAGTGCTAACTCCAATGAGCCCCAG
AACGTACGAGACGCCCGAGACGAGCTCCAGGACGAGCAGGAAGAGCTGGAGAAGACTCTC
GAGGAGCAGAAGGTGCTTGCTGACAAATCCAAGGCTTTGCGGGCAGGAAAGGCTCCTGCT
GTCATCTTCTCCCTGCAGGGAGAGTGCGTCTCGTCCCACATCGGAGAGTACGACTACGAG
GTGTGTTTCGGGCAGCAGTGCCACCAGCGAGGCAACAACATCAACGTGTCTCTGGGCCAT
TTTAACTCCATCGAGGAGCTGCCCCGATCAGCTGACTGGGATGAGGTTCTGGAAGGCCCT
CGGTACTCGTATGTCATGCGGTACGTTTCTGGTGCTAGATGCTGGAACGGGCCCGAGCGT
ATCTCCAACGTCCATCTTCGATGTGGAGCAGAGCCTCAGATTCTATCTGTTTCCGAGCCT
GAAAAGTGCGAGTATGATATTCGAATGGTGACCCCTGCTGTCTGCGAGGGCGCCATTGTC
CAGGAGGGAAAACATGATGAGCTGTAGGCCACCCTATCAATGACCAGCAATAGTTAGATA
TACATAAACGAGAATAAAATGATTTGATGTACCGGAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E26895g_CDS-001

Protein length: 429 aa.
Product: Conserved hypothetical protein

>YALI0E26895g_CDS-001 MKISAIFALGAASAAMALKGVAPEDEHLYKISNGIWKCLNHPHIRLEAHQLNDDYCDCPD
GSDEPGTAACVGIKDYDIRKKLTFYCANKGHIPGRLPSNRVGDGICDSDICCDGSDEDDG
ICPNVCAEMAAERITKENELKKTLSEGLNARQKLLGRLGAIQKTTKEEESAIIEKIYDIN
VGIKEAEKKLAAEIEKAKEDFGYEAPKPEQSPLEKLTNFLGPEIQQKIMGFATDARMWMV
ANGLMPHPDHTKSANSNEPQNVRDARDELQDEQEELEKTLEEQKVLADKSKALRAGKAPA
VIFSLQGECVSSHIGEYDYEVCFGQQCHQRGNNINVSLGHFNSIEELPRSADWDEVLEGP
RYSYVMRYVSGARCWNGPERISNVHLRCGAEPQILSVSEPEKCEYDIRMVTPAVCEGAIV
QEGKHDEL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG