YALI0E26917g

Overview

Description weakly similar to uniprot|C7Z8W9 Nectria haematococca hypothetical protein NECHADRAFT_100885
Locus type CDS
Locus tag YALI0E26917g

Location

Species Yarrowia lipolytica Positions 3190799..3192356
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1558 (nuc.)
Previous locus YALI0E26895g Next locus YALI0E26939g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E26917g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E26917gYALI0E26917g_mRNA-001YALI0E26917g_CDS-001

Nucleotide sequence

 

>YALI0E26917g
ATGATACCAAGACGGTTTTTGCGACTCCCTGTTATTGCGTGCTTCTTAGCACTCTGCGGC
ATCGTTCTCTACACTATTCACTCGACAGGGCACATCGACAAGCTCAACCTATACCGCTAC
ACGACGGGTAACAAAGCGGTGTATCGACCGGCAAGTGGAAAGCCCTCCAAGGTGATTCTG
CTGGAATCCGGAGGAAGTCACGAGGAGGTCACTACCGCATTTCTGACCTCGCTCGTCGAG
ACTACCTCCAAGTCTTCTGCGTTCATCTATCCCTTCTTCAAGCTGGTGCGATTTCAGATG
GGTCCTATCATGAAGTCGACCATTGGTAACCACACCAACGTGGCCAAGTACGTGCATAGC
AACAAACTGAAGGAGTACAAGACGCGCGTGGGCCGACCAGATGTCGTTCTCTCTATCACC
TGTGAGCACGACTCTAAAGAGCACTCTGCAGTGTTCAACGAATGGCTCGCCCAGGGAGTC
TCTCTTGTCTGTGTAGTTCATCACGCCGACAGATGGCTCGCCAACAGCGACTACGGTCAC
TACGAGCGACTGTCTCCTTGGATCGAAAAGAATCAAGTCACCTTTGTCACTCTATCTGAG
CACGTCAACCAGAACCTTAAGAACGAATCTGCTGCTACCTGGAGTCCCGAGCACCAGGAA
AAGCTCCGTACGAAGGTCTTTACTCCTGTTTTCAGAGCCCCCACCCGACCCCACAAGTCG
CCCATGCCAGTCCTGGGACTCAATCTACAAGGAGACTTTGATTCCAAGCGACGAGACTAC
AAGTTATTATTTAGTCAACTTGCAAAGATCGTTGACAGCATGTCTTCAGTCAAAATGTAT
CTTGTTGGTCATGGCATCCCACCTGAGGTCCCTGAGCAGATCAAGTCCAAGGTCGAATTC
ATGACAGACCTGTCTTTCACAGACTTTTATGGTCACATGAGCGAGGGTCTTGCCATTGTC
CCTGCCTTTGCATCCAATGACTACTACTCCAAGAAAGCCTCTTCTTCTGTCCCTGCTTCC
ATTATCGCAGGGGTTCCTTTGGTGGGAAGCCAGAAACTGCTTGATGCATACACTTACCTG
TCTGAAAACGAGGTGTGGTTTGCTGAAGAGGGCGAGACTGACATTGATGCTATCCACCGG
CTAGTTACCGAGACCCCCAGCCCCGAGGTTCTCGAGCAACAGCTACGTTTCCGTCAACGC
AAGCTGCTCGACAAGCGAGAGAGTCTCATTAGACTTAACGGAAGAATTATGGTTGATCTT
CTGCAGCATGTGTTGAGCACCGACGAGTCATACTACCGGATGGAATGGCAATGGGAGTGG
TAAGGTGGATTGGAGGAGGGTGGAGTGATAGACTGACAGTCTATGGTGTCGATCAGAAGG
ACTCGGCGGACTGTACAAAAACCCAAGAACTTCGGTGTGGATGCCAAAAGTAAACCCATC
AAGAGAGATGTGGTGTGACAATCTCAAGTGGCGCTATGAACTGATCGATTGAAACCAGGA
CTGGAAGAGCCTGGGACATTTTGTCTAATATACAATAAAAAGACGCTAACATTGATAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E26917g_CDS-001

Protein length: 441 aa.
Product: Conserved hypothetical protein

>YALI0E26917g_CDS-001 MIPRRFLRLPVIACFLALCGIVLYTIHSTGHIDKLNLYRYTTGNKAVYRPASGKPSKVIL
LESGGSHEEVTTAFLTSLVETTSKSSAFIYPFFKLVRFQMGPIMKSTIGNHTNVAKYVHS
NKLKEYKTRVGRPDVVLSITCEHDSKEHSAVFNEWLAQGVSLVCVVHHADRWLANSDYGH
YERLSPWIEKNQVTFVTLSEHVNQNLKNESAATWSPEHQEKLRTKVFTPVFRAPTRPHKS
PMPVLGLNLQGDFDSKRRDYKLLFSQLAKIVDSMSSVKMYLVGHGIPPEVPEQIKSKVEF
MTDLSFTDFYGHMSEGLAIVPAFASNDYYSKKASSSVPASIIAGVPLVGSQKLLDAYTYL
SENEVWFAEEGETDIDAIHRLVTETPSPEVLEQQLRFRQRKLLDKRESLIRLNGRIMVDL
LQHVLSTDESYYRMEWQWEW*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG