YALI0E26367g

Overview

Description similar to uniprot|P21951 Saccharomyces cerevisiae YNL262w POL2 DNA-directed DNA polymerase epsilon, catalytic subunit A
Locus type CDS
Locus tag YALI0E26367g

Location

Species Yarrowia lipolytica Positions 3128211..3135104
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 6894 (nuc.)
Previous locus YALI0E26345g Next locus YALI0E26389g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E26367g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E26367gYALI0E26367g_mRNA-001YALI0E26367g_CDS-001

Nucleotide sequence

 

>YALI0E26367g
ATGGGTCGACCTTTTAACGGAAACAACACCCATGTGGTGAAACAGCGCAGTGACGAGTTT
GAGCGGCGAAGGCTGGAGCGGATCGAGCAGCTGGGTCAAAAGTTTGCCGCAGTCGAACGC
CGAGATGCCATAGACGACCGAATGGGTTTTACTCGCTTCTCTGGCGATGAAAAACGAGTC
GGGTGGCTGGTCAACATGCACGAGACGTTGCTACAGTCGGAAACGGCCGAGCGGGGCCTG
GCAGCGGTGGACTACTACTTCTACGACGAGGAGGGAGGCAACTTCAAGTCGACGGTGGTG
TTCCGGCCCTACTTTTTTGTCATTTGCAAGCCTCATACTGAGCATGCGGTGAAGGATCTC
ATGGAAAAGATGTTTGAGCGGGTGCTCGCAAGCACGGAAATTGTTACAAAGGAAGATTTG
AACTTGGTGAGTGATAACAAGCAGCCCTGGATGAGTTGAGTGGCAGACATTGCAATGAGT
GGGAGAGATAACGAACTCTCAGCATCTCGCTGATTGCAGTGAGTCCATTACTGCTGAGTG
ATTCTTACTGCTGTGATTCTTACTGCTGTAATTCTTGCTATTAAGCCGTGTGTGACAATT
GGCTAACACAGACAAACCATCTCACAGGAAAGAAACGAAAGGCGGTGAAATTGGAATTTC
ACAACTCGGAGGATCTGAGCTCGACACGTTTCACGCTCAGCAAGATTGTCGACCGACAGA
CACAGCAGACAGAGCAGCATCTCAACATTTATGAGCTTGAAGGGTGAGTAAGAGAAAGAG
GGGAGAGGCAAGAGAAAGACTGTGTTGAAGTCACGTGGTCAGTCTTCAAACAAGATGTTC
AATATTAACCCAGCGATGTGGACACCAGCACAGACGTAGAATCATCCATCACTGGCATCA
AGGAATTTGATGTGCCGTTTGAAACCCGAGTGGCCATTGATCTGGACATTCGTGTGGGAA
ACTGGTACGAGGTCACCAAGGAAAACGACACGGCTGTGCTCAAACACATGGTTGAACGAG
AGTACCGAGCCGATCCAGTCGTCATGGCATACGACATTGAGACCGAAAAGGCTCCCCTTC
GTTTCCCCGACTCAGCCGTCGACAGAATCATGATGATTTCGTACATGATTGACGGCGAGG
GTTTCCTCATCACCAACCGAGAAATGGTGAGTGAAGACATTGAGGACTTTGAGTACACTC
CCAAGCCCGAATTCCCCGGTAATTTCACCATTTTCAACGAGCCTAACGAGAAGGCTGTGT
TGGAAAAGTGGTTTGAGCACATTCGAGACGTGTGTCCCACGGTGATGACTTCCTACAACG
GAGACTTTTTCGACTTCCCATTCATCGACAAACGAACAGCCTTCCATGGAATGAATCTCT
ACGACGAGATTGGATGGAAAAAGGTGGAGGAAGAGAGATACGAGTGTTCCTATTGTGTGC
ATATGGACTGTCTCAACTGGGTCAAGCGAGACTCGTACTTGCCTCAGGGTTCTCAGGGTC
TCAAGGCTGTGACAAAGGTGAAGCTGAGTTACGATCCCAAGGAGCTCGATCCGGAAAAGA
TGACTCCTTATGCACGAGACCATCCTCAGATTCTCGCGGAATATTCTGTTTCCGATGCTG
TGGCCACCTATTATCTCTACATGAAGTATGTGCATCCGTTCATCTTCTCTCTGTGTTGCA
TTATTCCCCTCAACCCCGATGCAGTGCTACGAAAAGGTACAGGTACTCTTTGCGAGATGC
TCCTCATGGTCAAGGCTTATGAGGGACGCATCATTCTTCCCGACAAGCACAAACCTGCTC
TTGAGCGTCATTACAAGGGTCATCTGGTCGATAACGAGACGTACACCGGTGGCCACGTGG
AGTCCTTGGCTGCTGGCGTGTTTCGAAGCGACATCATGGTCGATTTCGACATTGATACTA
ACAGTATCGACGAGCTACTGGTCAATTTAGACGAGACTCTCGAGTTTTGCGTCACTGTTG
AGGCTGGAAAGAAATCGTCTGATTTTGAGAACTTGGATGAAGTAAGAGACCAGATCATCG
AACAGCTTCAGGAGCTCAAATCCAACCCCAAGCGATCCGATTACCCGCTCATTTACCACG
TGGATGTCGCGTCTATGTACCCCAACATCATGACGACCAACCGACTTCAGCCCGACTCCA
TGGTAGACGAAAAGGACTGTGCTGTTTGTGACTACAACCGTCCCGACAAGACGTGCGCAC
GTGAACTAGAGTGGGCTCGACGAGTCGACTATTACCCTGTGTCAAAGGGAGATGTCAACA
ACCTAAAGCAGGGTCTGGTTGAGGAGTACTCCGGAGGTCGTTTCGGAAACGGCTCATCTG
TCGAGATCTCGTACGATGAAGGTATGACTGAGCGGGAAAAGTTCCAGAAACGAAAGGGCT
GGGCTGGATTGTCTGGTCAGGAGCAGGCTAACAAGCTCAAGGAGCGAGTGGCGGCCTTTT
CGCTCAAGACCAAGGCTCGAAAGACGGACTCGGAGACGACTGTGCAAAAGACCATTGTTT
GCCAGCGAGAAAACCCCTTCTATGTCGATGTTGTGCAAGAGTTCAAACAGCGTCGAATCG
ACTACAAGACAAAGGCGAAAAGGTGGAACAAGGAGGCTGCTTCTGCTTCCGATCCTGCGT
CTCGAGAGGAGGCCAAGAAGATGGCTATCACCAACGACTCGATGCAGCTGGCCCACAAAG
TCATTCTCAACTCCTTCTACGGTTATGTTATGCGAAAGGGTTCTCGATGGTACTCCATGG
AGATGGCCGGTGTGACTTGTTACACTGGAGCCAAGATCATCAAGATTGCCCGTCAGACAA
TGGAAGGTCTTGGTATTCCTCTTGAGCTCGATACAGACGGTATTTGGTGTATGCTGCCCA
AGACCTTCCCCGAGAAGTTCAAGTGCAAGTTTAAGGATGGTTCCAGCTACGAGCTTGAGT
ATCCCTGTTCTATCATGAACTACTTGGTGCACAGAGACTTTACCAACCACCAGTACCAGA
AGCTGAATCCCGAGACTGGGAAGTACGACACTCATTCAGAAAACTCCATCTTCTTCGAGC
TCGACGGACCCTACAAGTGCATGATGATGCCTACGTCGACTGATAAGGGTAAGGGTCTCA
AAAAGCGGTACGTGGTTTTTGACGACCGCAATAAGATTGTCGAGCTTAAGGGCTTCGAGG
TCAAGCGACGAGGAGAGCTGTCGTTGATCAAAAAGTTTCAGTCACAGCTGTGGGACACGT
TTCTGGAGGGCTCCAATCTCGTCGAGTGTTATGCTGCTCAGGCTCGAGTGGCTGAAGCTT
GGCTGGCAGTGATTGACTCTCGCGGCAAGAACCTATCCGACGAAGAGCTCATTGACCTGG
TTTGTGAGAACAAGTCCATGTCCAAGCCTGTGCATGAGTACGGCTCTCAGAAGAGTACTG
CTCTGACGACTGCCCGTCGTCTAGCGGAGATTATGGGCGACTCCATTCTCACGGGAGGCA
AGCTGTCAACCAAGTACATCATTGCGGTTCGAACCAAGAACTCCATGCCTGTTCCTGAGG
CTAAGAAGGGTTCCGACGAGGACTCTTCAACTGCTGATCGAGCTATTCCCACTCTGGTTT
TCGAAACCGAATCTCTGGACGAAAAGCTGCGGTTCTTGAAACGGTGGATGGGCCCTCGAT
GGGAATCCACGGACCCCCGAGACGTCATTGACTGGATGTACTATCGAGAACGTCTGGCGA
CGACTATCAACAAGCTTGTGGTGATTCCTGCCATTCTGTTGGGTCTCAAGAACCCCGTTC
GAGGCTGTGATCCCCCCGAATGGGCTTCTGACATCATCAAGCAACGAGATAACCCCATCA
AGCAGAGCACCCTGAGCTCTTATTTTGTCAAGGGTAAACTTCCCACTCCTGAGCCCATTC
TCAGTGAAGAAGATGAGGTCATGGAGATCCAGGTGGGCGACATTGAAAGCATCGGGACCA
CTCCTTCTCCTTCCAGACCCCCTGGAGTGCCTGCCCGAGTGGTTGTGTCTAAACGAGTGC
GCAAAACTGTTGAGGAAACGGACAAGTCCACTCCCTCTCTTCCTCACAAGGCCCCCGATC
CGTTCGCCGACTATGCAGCCTACATTAAGTACGCCAAGGTCAAGTGGAAGCATCAGAAGG
CTCAGCGAGACCGAAGAGCCCATCTTTTTGGCGAGTCCGACAATGGCATCGCTTCTTCGT
GGGTGTCCAAGAACGCCCACCTGGCTCAAGACGCCTGGCACCTGGTGTCCATCCATGCTG
CCGAAAAACCTGGCCAGGTGGAGGCCAGCGTCATCATCGGAGACAAGATGCAACGGGTGC
AGATCAATGTGCCGCGCAAGGTGTACGTGGGGTCTCGTGAGCCGCTGAAGTGGGATAAGT
TCACTGACGTGACCAATGCCATGGCTGTGGCTGAAGAGGAGCAACCCAAGTACCTCTACC
GAGCAGTCATGTCTGAAGACATGTACCAGACGGAGATGACTAACCCGGAGTCTCCGCTGA
AGGACCCTCACGTGACGAAAATCTACGAGGCCGACGTGTCGCCTGATTCACGTGCCCTCA
TTGAGCTTGGATCCACATTCCATCTTGATGCCTCCACTCCTGGTATCCTCTCCAAGGGCT
TCACCCATGGCTTTGAGGCCAAATGGTTCAAGTCAGGTGACTCGCGGTCCTACCTGCAAA
ACTCAGGACTCTCCTACGCTCACATTGTGCACGTGGTTTCTTCTGCCGTGGAGATATTTG
TCATCACACCCACCTGGGACGCACCAGCTCTTGTGTTTGTGCACCAGTCGTCTTCCAGTG
AAAAGTTACCTGACATCTCGAAGGAGTACGCCCGTCTGCGACGTGGAGAACGGTACAAGC
AGAACATGGACGATTGCACCGTCTTTTCCTTCCCCGACACAATGCAGTACGAGGTGGAGT
ACTGTTCCAACCACCGACGAATGCTGCAGAAGGTGTCCAAGGCGTGTGACTCACTGTCTG
GCTCCCGAAACGGCCAGCTGGTGTTTGCACTCCATTCTCCGGACAGAAACGTGGATGAAA
AGGTGGCTGCCCTGGCCAGAATCCCCTGTATTCGGCTGAGACCCGTTCCTCCGTCTACTG
CTGCTGTTGGATGGCAACGGGATCTGGTTCGACGGCTGATTGCATCGTTCTTGTCACATG
GAGCCAACATTTCGTACCTTGTCGAGATGGCTCGGTATGCCAAGATGCCTCTGTGTCATG
TGCAAGATACCCGGGACGTGATTGACGTATCATACGCTCGTCGGCTCATCCAGAACAGTG
TCGTTTTGTGGTGGTCTGCTGCTCTGTCTACCGGAGGAGCCCTCACTGACCAGGCGGAAG
TGCCTGTCGCCAACAATCCTGGACTGTACACCAACATTTGTTTCGAGATCAAAATCGAGC
ATTTGGTGCTCAACGCCTTGTTGCAGAGTGCTGTGATCCAGGATACTGAGGGAGACATTC
ACAACGAGCTTCTCTCCAACGCCTTCAACCCCCACGCCCTCAAAACCCTCAAAATGGTGG
TCAAGGAGTGGTGGGAGCACGGGGACAAGAAACGGCCTCCCCAGGATCTGCTGGACAACT
TCACAGTGTGGGTTTATGCGCCTGAGTCGCGTCTTTTCTCCCCCCAGTTGCTGTACCACA
CTCAGAACCTGACGAAGAAGACCTTCCTGTATCTTGCTCAAGAGTGTCGAAAGCACCAGG
CTCAGTTGGTGTACGCTGATCAACACAAGCTTGTGTTGCAGACAGAGAAGACGGAGCTTC
AGCTGGTGTACTCGTACTCCAACTACATTGTTCGGCAGATCAGAACCCATCCCATTCTCA
AGTATGTCTCTGTCGACATTACTCGCTACTGGGACACCTTCCTGTGGATGGACAAGTGGA
ACTACGGGGGCTACTCGTCTGACGTCATTGTTGACCCCTCCAAGCAGAGCGAGTCTCTGT
TGATGCATTGGCACATTGCCAACTTCTTGCCTGAGACTCTACAGCAGGAATTTTCCAAGT
GGGTCCAGGAGTACATTCATTTGTTGCGGCTGCGGAAATACCCCGAAAACAGAACTACTG
ATGTTGACGACATGCCCAGTGACACTCCCATGCTCACCGACGGAGACAAGGACGACGCTG
CCCTTCTGAGCGACAAGTTCTTTGGCAAGGGTGTGGTTTCTTACCTGCATCCCAAGCTCG
TGAGACGGGTCAAGCTGCTGGCTCAAAAGCTATCGGATGTTCTCTCCTCAGGCGACTCCA
TTGACGCCTTTAAGTTCCCCGTGCTTCCCGGGTCCATGATCCAGCCAGAGACTAATCCCG
TGGTCGAGTTCGCCAAGTACGTGTGCCACATTTACGGCATCAACGCCAAGGCCAACTTTG
AAGTCCAGATTTTGCTCAGAGACCTTCTTAACATCTTTGATATCAACGAGTTTTCCGAGG
AGGGCACGTTCCGAGATCCGTCCATGTCGCTCAAGCTAACCAACATGATGTGTTTCAAGT
GCAAGAACCCCTGCGATCTGGACCTATGCAAGGACTCGTGCTGCACCAAATCTGGCTTCA
GATGCCCCCTCTGCAACTCGCTCTATGATATGGTCATTGTGGAGCAGCGGCTGGTGGGTC
AGCTGCAGCGAATGATTCTCGAGTACGAGACGCAGGACTTCCGCTGCGACAAGTGTCGAC
GAGTCAAAGAGTATGAGCTCACGGAGTTCTGTCCTTGTTCTGGCTCTTGGGTCACTATCA
TGTCTGCCGAAGACGTCCACAAGGAGCTGTCCATTTATGATCGGTGCGCTCGGTGGTTCG
AGTTGAAGATGCTTGGTTCGTTCCTCAGACAGTTGGGTTATGTTTAGGAGGAGCGTTGTT
GAGGAAGACTGACGTGAGGAGATATTTATCTAATGTATGTTTGTACTGTATGGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E26367g_CDS-001

Protein length: 2184 aa.
Product: Catalytic subunit of DNA polymerase epsilon, putative

>YALI0E26367g_CDS-001 MGRPFNGNNTHVVKQRSDEFERRRLERIEQLGQKFAAVERRDAIDDRMGFTRFSGDEKRV
GWLVNMHETLLQSETAERGLAAVDYYFYDEEGGNFKSTVVFRPYFFVICKPHTEHAVKDL
MEKMFERVLASTEIVTKEDLNLTNHLTGKKRKAVKLEFHNSEDLSSTRFTLSKIVDRQTQ
QTEQHLNIYELEGDVDTSTDVESSITGIKEFDVPFETRVAIDLDIRVGNWYEVTKENDTA
VLKHMVEREYRADPVVMAYDIETEKAPLRFPDSAVDRIMMISYMIDGEGFLITNREMVSE
DIEDFEYTPKPEFPGNFTIFNEPNEKAVLEKWFEHIRDVCPTVMTSYNGDFFDFPFIDKR
TAFHGMNLYDEIGWKKVEEERYECSYCVHMDCLNWVKRDSYLPQGSQGLKAVTKVKLSYD
PKELDPEKMTPYARDHPQILAEYSVSDAVATYYLYMKYVHPFIFSLCCIIPLNPDAVLRK
GTGTLCEMLLMVKAYEGRIILPDKHKPALERHYKGHLVDNETYTGGHVESLAAGVFRSDI
MVDFDIDTNSIDELLVNLDETLEFCVTVEAGKKSSDFENLDEVRDQIIEQLQELKSNPKR
SDYPLIYHVDVASMYPNIMTTNRLQPDSMVDEKDCAVCDYNRPDKTCARELEWARRVDYY
PVSKGDVNNLKQGLVEEYSGGRFGNGSSVEISYDEGMTEREKFQKRKGWAGLSGQEQANK
LKERVAAFSLKTKARKTDSETTVQKTIVCQRENPFYVDVVQEFKQRRIDYKTKAKRWNKE
AASASDPASREEAKKMAITNDSMQLAHKVILNSFYGYVMRKGSRWYSMEMAGVTCYTGAK
IIKIARQTMEGLGIPLELDTDGIWCMLPKTFPEKFKCKFKDGSSYELEYPCSIMNYLVHR
DFTNHQYQKLNPETGKYDTHSENSIFFELDGPYKCMMMPTSTDKGKGLKKRYVVFDDRNK
IVELKGFEVKRRGELSLIKKFQSQLWDTFLEGSNLVECYAAQARVAEAWLAVIDSRGKNL
SDEELIDLVCENKSMSKPVHEYGSQKSTALTTARRLAEIMGDSILTGGKLSTKYIIAVRT
KNSMPVPEAKKGSDEDSSTADRAIPTLVFETESLDEKLRFLKRWMGPRWESTDPRDVIDW
MYYRERLATTINKLVVIPAILLGLKNPVRGCDPPEWASDIIKQRDNPIKQSTLSSYFVKG
KLPTPEPILSEEDEVMEIQVGDIESIGTTPSPSRPPGVPARVVVSKRVRKTVEETDKSTP
SLPHKAPDPFADYAAYIKYAKVKWKHQKAQRDRRAHLFGESDNGIASSWVSKNAHLAQDA
WHLVSIHAAEKPGQVEASVIIGDKMQRVQINVPRKVYVGSREPLKWDKFTDVTNAMAVAE
EEQPKYLYRAVMSEDMYQTEMTNPESPLKDPHVTKIYEADVSPDSRALIELGSTFHLDAS
TPGILSKGFTHGFEAKWFKSGDSRSYLQNSGLSYAHIVHVVSSAVEIFVITPTWDAPALV
FVHQSSSSEKLPDISKEYARLRRGERYKQNMDDCTVFSFPDTMQYEVEYCSNHRRMLQKV
SKACDSLSGSRNGQLVFALHSPDRNVDEKVAALARIPCIRLRPVPPSTAAVGWQRDLVRR
LIASFLSHGANISYLVEMARYAKMPLCHVQDTRDVIDVSYARRLIQNSVVLWWSAALSTG
GALTDQAEVPVANNPGLYTNICFEIKIEHLVLNALLQSAVIQDTEGDIHNELLSNAFNPH
ALKTLKMVVKEWWEHGDKKRPPQDLLDNFTVWVYAPESRLFSPQLLYHTQNLTKKTFLYL
AQECRKHQAQLVYADQHKLVLQTEKTELQLVYSYSNYIVRQIRTHPILKYVSVDITRYWD
TFLWMDKWNYGGYSSDVIVDPSKQSESLLMHWHIANFLPETLQQEFSKWVQEYIHLLRLR
KYPENRTTDVDDMPSDTPMLTDGDKDDAALLSDKFFGKGVVSYLHPKLVRRVKLLAQKLS
DVLSSGDSIDAFKFPVLPGSMIQPETNPVVEFAKYVCHIYGINAKANFEVQILLRDLLNI
FDINEFSEEGTFRDPSMSLKLTNMMCFKCKNPCDLDLCKDSCCTKSGFRCPLCNSLYDMV
IVEQRLVG


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG