YALI0E26345g

Overview

Description similar to uniprot|Q05497 Saccharomyces cerevisiae YDR338C Uncharacterized transporter
Locus type CDS
Locus tag YALI0E26345g

Location

Species Yarrowia lipolytica Positions 3124380..3126257
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1878 (nuc.)
Previous locus YALI0E26323g Next locus YALI0E26367g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E26345g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E26345gYALI0E26345g_mRNA-001YALI0E26345g_CDS-001

Nucleotide sequence

 

>YALI0E26345g
ATGTCGTCATACGACTCGCACCTGCTAGGCTCGTCGGCCGAAACGGCCCCGATAGCCATC
TCGGAAACGCCGCAGAAAAAAAAAGGCGGACATTTCAACCGAACCCCAAATTCAGCTGGA
GCAGCTTTCGGCTCGCTCGGTCGATCCGGAGTTCGAGTTTCATACAACTACTCGGATGAA
GATGACGACGACGAAACCAACGATGACTCGGAATTCGACGATGCGTCGTCCATGTACTCT
ACACAGGCTGAGAGAGCCACCCAGGAACAGGAAGAGCTGCTCAAAAAGGCCCGCCCCCAG
GCCAACTATGGAGGCACCTCTAACGGTAACAACAACAACAACAATAGCTACGGAGGAACC
ACTACCCACGCTCGAACCCGAGAAGAACGACGAGCAGTCTACAAGGCATTCGATGCGGCT
GTGAGAAAGGGAGAAATTCAGACTACTGCCAGCACGGAAACGAAAACGATTCTCAAGTAC
TCGGCTCCACTAACCATGACCTTCCTCATGCAATACTCGCTGACTGTCGCATCGGTCTTC
TCCGTCGGCCATCTCGGTAAGAATGAGCTCGCCGCATGTTCTCTGGCCTCCATGACCTCC
GCCATCACAGGTTTTGCTGTCGTCCATGGAGTGGCCACCTGTCTAGATACCCTGTGTGCA
CAGGCGTACGGCCGAAAAGACTACAAAATGGTCGGAGTTCATTTCCTGCGATGCACAATC
TTTCTGTGGATCATCGCTGTGCCTATAATTCTCTTGTGGGCCGTTTTCGGACGTCAGCTG
CTGCACCTGCTGCTCGACGATCCCGAACTCATCCATTTTGCAGCCCTCTACCTCGAGGTC
CTGGCCTGTGGTTTCCCCGCTTATATTCTGTTTGAAAACCTCAAGCATTACCTGCAGTCC
CAGGGTGACTTCAACGCCGGTACCTACATTCTTCTTATCTGCGCTCCCATCAACATCTCG
CTCAACTACCTGCTGGTGTGGAACGAGCACTTTGGCTTGGGCTACGTGGGAGCCCCCATT
GCCGTCGTCTTCACCGACTGGCTCATGGCCACCATGCTGTCTCTGTACGTCGTCTTCATC
AACGGCCGAAAGTGCTGGTGCGGTTTCCGACCAGATAACCTCTTCACCGGCTGGGGCAGA
ATGATCCGACTGGCTATTCCAGGTATCATCATGGTCGAAGCCGAGTGGCTGGCGTTTGAA
ATTGTCACCTTCGCTGCCTCTAGATTCGGAACTGACGCCCTGGCCTGCCAGTCAGTGCTG
GTGTCTGTCTGTGGCATCATCTACCAGATTCCCTTTGCTATTGGCATTGCTGCCTCCACT
CGAATCGCCAATCTGGTTGGTGCCAACCTTACTGCTGCTGCCCGAATCTCTGCCAGAATG
GCTGCTGTCATCTCTCTTGTCTTCGGAGTGCTCAACATGGCCTTCATGCTGGGTCTCAGA
GACACCATTGGAAAGATGTTCACTAATGACGAGGCCGTTCTGCAGCTCGTGCGTGAAACC
ATGCCCTTCGCGGCCCTCTTCCAGGTCAACGATTCACTTGGGGTCATCTCTGGAGGCATT
CTCAGAGCCCAGGGACGTCAGAGAATCGGAGGATATCTCAACCTCTTTTTCTACTACGTC
GTGGGTTTGCCGGCCGGTGTAATCTTTGCCTTCCACTGGGGCTACGGCATTGAGGGTTTC
TGGATCGGACTTACCATTGGCGTCTTCTTTGTCTCCATCCTACAACTCTACTTTGTGTGG
AAGAGTAATTGGAGAGAGATTGTCAAGGATGCTTTGAGAGACGGAAAGACCCAGGCCGCC
ACCACTCATGCTTAAACGAACACAACACGGGGACTTTTATATATTGAATTTAGAGCTTGA
TCAACTAAGATCAACAAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E26345g_CDS-001

Protein length: 605 aa.
Product: Transporter, putative

>YALI0E26345g_CDS-001 MSSYDSHLLGSSAETAPIAISETPQKKKGGHFNRTPNSAGAAFGSLGRSGVRVSYNYSDE
DDDDETNDDSEFDDASSMYSTQAERATQEQEELLKKARPQANYGGTSNGNNNNNNSYGGT
TTHARTREERRAVYKAFDAAVRKGEIQTTASTETKTILKYSAPLTMTFLMQYSLTVASVF
SVGHLGKNELAACSLASMTSAITGFAVVHGVATCLDTLCAQAYGRKDYKMVGVHFLRCTI
FLWIIAVPIILLWAVFGRQLLHLLLDDPELIHFAALYLEVLACGFPAYILFENLKHYLQS
QGDFNAGTYILLICAPINISLNYLLVWNEHFGLGYVGAPIAVVFTDWLMATMLSLYVVFI
NGRKCWCGFRPDNLFTGWGRMIRLAIPGIIMVEAEWLAFEIVTFAASRFGTDALACQSVL
VSVCGIIYQIPFAIGIAASTRIANLVGANLTAAARISARMAAVISLVFGVLNMAFMLGLR
DTIGKMFTNDEAVLQLVRETMPFAALFQVNDSLGVISGGILRAQGRQRIGGYLNLFFYYV
VGLPAGVIFAFHWGYGIEGFWIGLTIGVFFVSILQLYFVWKSNWREIVKDALRDGKTQAA
TTHA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG