YALI0E26389g

Overview

Description similar to uniprot|Q04660 Saccharomyces cerevisiae YMR049c
Locus type CDS
Locus tag YALI0E26389g

Location

Species Yarrowia lipolytica Positions 3135896..3138473
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 2578 (nuc.)
Previous locus YALI0E26367g Next locus YALI0E26399r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E26389g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E26389gYALI0E26389g_mRNA-001YALI0E26389g_CDS-001

Nucleotide sequence

 

>YALI0E26389g
ATGGTACGAAGTCGTTCCAACTCCGTTAAGAAGGATTTGAAGCGCAAAGTCGACGAGCCT
GTCGACGTGCAAGACGAGTTCGATGTCGAGGGACTCATTGATGAGGGCGACTCCGACGAC
GAGGATGAAGCTGAGCAGGAAGTGGCACAAGAAAATGTGACAAAGGACAAGAAGAACACC
AGCAAGACTGAAAACGAAGAAGATGCCGACGATGAAAGTGACTCTGACGCCGAGCTTGAG
GCACTCATCGGTGAAGAGGAGGATCTGTCTGGAAGCGAGCTGGAAGACGAGCTGGCTTAC
TTTTCTGATGCTGGAGACGACGAGGTCGACCCCTCGATTCTAAAGCATTTGGATGACGGA
GTTCGTCTGCGATCTCTGTCTCGATCTTCCGACCAGACTGATGAGCTCAAGGACGTGGTT
GAAATTGTGCCTGGAGCCGACGGCAAGCCTCGAATGATCAAGAAGGAAATCCATGCTGTC
TACGACTCGGACGATTCGGACCAGGAGGAATCCAATACCATTGGAAACGTGCCCCTGTCT
GCCTACGACCAGATGCCTCACATTGGATATGACATCAACGGTAAGCGAATCATGCGACCC
GCTACCGGTTCTGCTCTGGACAACCTACTGGAGACGATTGATTTGCCCGAGGGATGGACC
GGCCTGCTAGACAAGAGCACCGGAAAGGGTCTCAACATTTCCAAGGAGGAACTGGAACTC
ATCAAGCGGATTCAGAAGAATGAGACCACCGATGACGCCTCCAATCCCTACGAGGACCTG
GTGGAGTGGTTCTCTTCCAAGACAGAGATCATGCCTCTGTCTGCTGCGCCCGAGCCCAAG
AGACGATTCATTCCCTCCAAGCACGAGGCCAAGCGAGTCATGAAGATGGTGCAGGCCATT
AGACAGGGTAAACTGCTGACAAAGCCCAAGGAGGACCCTGACGCCCGACCCAACTACGAC
GTGTGGGCCGACAACCTCACGGACGTCCAGGACCACGTCATGACTCTGCGAGCCCCCAAA
ATGCCCCCTCCCACCCACGACGAGTCCTACAACCCCCCTGCCGAGTATCTGCCCACCGAA
GAGGAGATTGCCGAGTGGAATGCTCTTGCTCCTTCCGAGAGAGAGCGAAACTACGTGCCC
AAGAAGTACACTGCTCTGCGACATGTGCCCGGCTACTCCGAGTCTGTTCGAGAGCGTTTC
GAGCGGTCTTTGGATCTCTACCTGGCTCCTCGAGTGCGAAAGAACAAGCTCAACATTGAT
CCCGACTCTCTGATTCCCGATCTCCCCTCCCCCAAGGATCTCATGCCTTTCCCCATCAGA
TGTGCTACCACCTACAAGGGCCACAAGGGCAAGGTTCGAGCCATCTCTGTGGATCCCAGT
GGAGAGTTCCTTGCCACTGGAGGCGACGACGGAACTCTTCGAGTTTGGGAAGTGCTCACT
GGTCGAGAGCTGTACCGATGTCGTCTGGTGGCGTCCATTGATGCTCAGGATGACTCAGTC
GAGTGTGTGCAGTGGAACCCCGCTGTCCCTGGCATGCTGGCTGCCTCTGCTGGTGAGCAT
ATTTTCCTGATTGTGCCTCCCACGCTGTTTGACTTTGATATCGAGAACACCGGCCGAGAG
AAGATTGAGCAGGGATGGGGTTTTGCCGAGGGAGGACGAGAGCAGCAGGATATCGATACC
AAGGGTCTGGATGACGATGCTGACTCCGACTCGGACGACGAGACCGGTCACGTCAAGAAG
AAGAGCCCTCCTGCCAAGTGGATCACCCCCACCGCCAAGCAGCAGGCCTCTGGTATTGGA
GCCATCATTACCGCCACCAAAACCATCAAGCGACTCGCATGGCACCGAAAGGGAGACTAT
CTGGTCACTGTGGCCCCCTCGGCGCAGCACAGAGCCGTGGCCATCCACCAGATCTCTAAG
CATTCGTCACAGTCGCCTTTCAATAAGTCCAAGGGTATTGTGCAGGACGCCATGTTCCAT
CCCTTCCGACCTCATCTGTACGTTGCCACCCAGCGATACGTGCGTATTTACGATCTGGCC
AAGCAGGTCATGGCCAAGAAGCTTATGCCCGGTGCTAGATGGGTGTCTTCTCTGGACATT
CATCCCCGTGGTGATAACGTGATCCTGTCGTCGTTCGACAAACGGCTTCTGTGGCACGAT
CTCGACCTCAGTGATAAGCCCTACAAGACCCTGCGATACCACGAAAAGGCCGTGCGGCAC
GCAGCATTCCACAAGGGTGGTCTGCCGTTGTTCTGCTCCGCTTCTGACGACGGTAATATT
AACATTTTCCACGGCACCGTCTACGACGACATGATGACCAACCCTCTGCTGGTGCCTCTC
AAGGTGCTCAAGGGCCACGATGTCAAGAGCGGTCTGGGTATTCTGCGGGTTGAGTGGCAT
CCCCGGGAGGCTTGGTTGTTTTCAGCCGCTGCTGACGGAACTGCAAAGCTGTGGACCACG
TAAGGAGTGGTTCACAAGTGCGCGAGGATGTGTTGGAATCTTCCAATGGTGCATAGCAAC
AATGCTAGGAGGTAGCAAAGTTGTCGTTTAATAAAGATATTGATAGAACTGACGCCAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E26389g_CDS-001

Protein length: 821 aa.
Product: Constituent of 66S pre-ribosomal particles, putative

>YALI0E26389g_CDS-001 MVRSRSNSVKKDLKRKVDEPVDVQDEFDVEGLIDEGDSDDEDEAEQEVAQENVTKDKKNT
SKTENEEDADDESDSDAELEALIGEEEDLSGSELEDELAYFSDAGDDEVDPSILKHLDDG
VRLRSLSRSSDQTDELKDVVEIVPGADGKPRMIKKEIHAVYDSDDSDQEESNTIGNVPLS
AYDQMPHIGYDINGKRIMRPATGSALDNLLETIDLPEGWTGLLDKSTGKGLNISKEELEL
IKRIQKNETTDDASNPYEDLVEWFSSKTEIMPLSAAPEPKRRFIPSKHEAKRVMKMVQAI
RQGKLLTKPKEDPDARPNYDVWADNLTDVQDHVMTLRAPKMPPPTHDESYNPPAEYLPTE
EEIAEWNALAPSERERNYVPKKYTALRHVPGYSESVRERFERSLDLYLAPRVRKNKLNID
PDSLIPDLPSPKDLMPFPIRCATTYKGHKGKVRAISVDPSGEFLATGGDDGTLRVWEVLT
GRELYRCRLVASIDAQDDSVECVQWNPAVPGMLAASAGEHIFLIVPPTLFDFDIENTGRE
KIEQGWGFAEGGREQQDIDTKGLDDDADSDSDDETGHVKKKSPPAKWITPTAKQQASGIG
AIITATKTIKRLAWHRKGDYLVTVAPSAQHRAVAIHQISKHSSQSPFNKSKGIVQDAMFH
PFRPHLYVATQRYVRIYDLAKQVMAKKLMPGARWVSSLDIHPRGDNVILSSFDKRLLWHD
LDLSDKPYKTLRYHEKAVRHAAFHKGGLPLFCSASDDGNINIFHGTVYDDMMTNPLLVPL
KVLKGHDVKSGLGILRVEWHPREAWLFSAAADGTAKLWTT*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG