YALI0E25003g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0E25003g

Location

Species Yarrowia lipolytica Positions 2992923..2993813
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 891 (nuc.)
Previous locus YALI0E24981g Next locus YALI0E25025g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E25003g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E25003gYALI0E25003g_mRNA-001YALI0E25003g_CDS-001

Nucleotide sequence

 

>YALI0E25003g
ATGACCTCTCACACGGGCACCCCGCTGCTGCAAGAGGCGTGCTCCTCGTCCTCAGTGCCT
CCCATGTCTCTCGACGCCTTCAACGAAAAGTTGTTGATACACCCATCCGGCGAAGAGCAG
GTGGTGCTATCTTGTGCTACACAGTCCCATGTGGCCACCCGCAGCCGCAGACGCTATGAT
GTGGACGTTTTCTTTGACAGACAACAGAACGAGAGCTCCCAGGGAACCACTCCCGCAGCT
ACAGGCTCCGACAAGAGCAAGGGTAAGCAGCCGGCCGTGAGTGCCACGGTCGAAAGCATT
TCCGCACCTCTGGCTTCGCAAGTGGTGCCCCCAGCGGCAGTCTCGCTCTTCCCAGCTACA
AACATGAACCAGTTTGACTCAAAGTCCGAAGAATATATTCCTTTGGACGGTTGTGTTGAG
GGATAGACCAAAGATACGGTCAAAGGTTACAAGCGGAGCTCGAATGGAGACAATAGCGGC
ACAGGATGACGACACAGGCCGACGACACAGGCTGACGACACAGGCTGACGAACACATACA
AACGCACACAAACAAACAAACACACACAAACATACACACACAGCCTCGATCATCGGATGC
TACATTGGATCCATTAATTAGACCCCTCTGAGCGTTGGAATGAGACTGTATCAAGGATAG
GATCAAGTGACACTCTGCCGATGAAGCCAACTTTGTTTTTGTTGGCACTTGACGCAAGGG
TGACTGATTGATGGCTGAAGGATGATGTACAGCATATCGGACCTGGCGAGACATATGACG
TATATGACTTCGATATGAAAGCCGGCAGGACTGGCTACTGTGCCCGAACAAGTAGACTAC
ATTACTCACTCACACTATTATTTATTAATGCATTTCACGTATTTTATTGAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E25003g_CDS-001

Protein length: 142 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0E25003g_CDS-001 MTSHTGTPLLQEACSSSSVPPMSLDAFNEKLLIHPSGEEQVVLSCATQSHVATRSRRRYD
VDVFFDRQQNESSQGTTPAATGSDKSKGKQPAVSATVESISAPLASQVVPPAAVSLFPAT
NMNQFDSKSEEYIPLDGCVEG*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG