YALI0E24981g

Overview

Description weakly similar to uniprot|G3AUV3 Spathaspora passalidarum hypothetical protein SPAPADRAFT_63658
Locus type CDS
Locus tag YALI0E24981g

Location

Species Yarrowia lipolytica Positions 2987521..2989538
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 2018 (nuc.)
Previous locus YALI0E24959g Next locus YALI0E25003g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E24981g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E24981gYALI0E24981g_mRNA-001YALI0E24981g_CDS-001

Nucleotide sequence

 

>YALI0E24981g
ATGCCCTACTCATGGGATGATGTCTATGACTTTATGAGTGCGGACTTCCAGGACCAGTTT
CACATTCAGTACGCTGATGGATCGATACGAGGCAAGAGGATCGACAAATACTTGCCCGAT
GACGCAATCCACCTGCGCAAACGACTGGTTAGTGACGAGGACTCAGCCAAAGTCAGTGGA
GGACAGTTGTACTTGGATCTCATGATCGGCTGGTCCAAAGGTCATGGTGTGGGTGGCGAC
GACAAGCGGTACAAACTGTCTGTCAACCTGTGGAACAACGTGACGATCCTATACGACTAC
GAAGACATTCCTACGTGTCCCGAACGAGACAGAAACCTGTGTGACCAGGTGACAGACCCA
CAGTGTGTGTTCGCAGACGCCACGAAATGCGACTACAAAGACAACATCTATGCATACAAC
ACAACCAACGGCACCAACGTGAATGAGGTGCTTCTTGGCTCAGATTCAGGCTACAACATC
TCCCTGATTCAACAGTCTATCACAGGTAACCTGTACACAGACTGGGTTCAAGTTGGAGAC
CCTGCTACAGGAGCAGCTTTTTCAGTGGACGGATTTGCATTTGTGGCAGCTCGAAAGGGC
ACCACGCAGAGCCCAGGTATGGGGTTTGCCCCGGGACACTACCTCACTGGTCTCATGAAC
ACCACTAATGTGACCACGGACTTTGCTGCCGCTCTCATGTACAACGGATACACAGAGTCG
CGATCTCTGGCGCTATACATGGCTAACGGATCCAGTGCATCGCCTCATATGATGTTTGGA
GGACTGGATACATCATTAGCCAAGGATAACTTCTTTGTGTCCTACCCACTACTCAAGGGA
AACAACTTCTCCTACCCAACTCAGTATATGGTAACACTCACAGGAGTGTCTGTTACGGCC
GACGATGGAACTTCTGCATCTTTGGGAGAACTGGGAGGGTCGTGTGGAGATGGGGACACC
AAGGGTGACTGTGTCCCAGTGGGATTTGACACTACAAAGTACATGTCCTACCTACCCCGA
AACGTGGTCATTAACCTGGCCATCCAGCTCAACGCAATGTACTCGTCTGACCTGCAGCTG
TGGATCCAGTCATGCGCATACAGAACCATTGGTGGATATTTGAACATCGAGCTGACTTCT
AATGTCTTTTCAGTGCCCATCTCTCAGATGCTCATGCCCATGATTGACGATCAGGGCAAC
GCTATGAAATTTAACGGCGGTGAAGACGCGTGTTATCTTGCTCTCAGACCGTCTGAAAAC
AATGGTTACAACTCTCTCGGTCTGGGCTTCATGCAGAACTTCTACATGGTATTTGATCCC
GATGACAACTACGTCTCCCTGGGTACACTCAAGAGTCAGCAAGAGCTGGATACCGAGGCT
TTCAAGAACAGGTACCCGAACCCTGTCAAACCTCTCAAACCAGGCAGGCTGTCCAAAATT
GCTAACGTAACTACAGTTTCCGAACAAGCCCAAATCACCTTCCAGTACGTTCCTCCCCAT
GACGTCACCGAGATCATCACCACGACATCCAACGGAGTAGCTCTGCAACAAGGCCCTCTC
GGAGCTCCTGTCCCTACGTCAGCAAACTCTCTGCTGGTTATTACATATGGCTCTTCAGTC
ATGTCGCTCCAGGGCATTCCCATCGGAACCTCAGTTCTGGAGTCCGGCACCGTGTCTGGA
AATGCCAGAATCGATCCCACAGGCGCCACGACTCGGTCAACGTCTTCCACGATCAAACCC
CCGCAGATCCAGATTCTGGGAACTCCAATTTCGGGCTCCCTGACCATCTTCAGGCAAGGG
TCTCCCACAGAAGCACCCAGGATGGCCAAGCAGGCGCCTATGGGCAACTCTAACATTGGC
GCCCCTCGTTCTGGCGCCACCTCTTTACTCCAGGGATTTGGAGTCACTCTTGGGATGTGT
CTCATTGGAGCCTGTATTATCATTGTTGCCTAAAACTAACAGCTAACCGACAACTAGCCA
TTGCATTGTATATATTTAATAATAGGTTGACGCAGGAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E24981g_CDS-001

Protein length: 651 aa.
Product: Conserved hypothetical protein

>YALI0E24981g_CDS-001 MPYSWDDVYDFMSADFQDQFHIQYADGSIRGKRIDKYLPDDAIHLRKRLVSDEDSAKVSG
GQLYLDLMIGWSKGHGVGGDDKRYKLSVNLWNNVTILYDYEDIPTCPERDRNLCDQVTDP
QCVFADATKCDYKDNIYAYNTTNGTNVNEVLLGSDSGYNISLIQQSITGNLYTDWVQVGD
PATGAAFSVDGFAFVAARKGTTQSPGMGFAPGHYLTGLMNTTNVTTDFAAALMYNGYTES
RSLALYMANGSSASPHMMFGGLDTSLAKDNFFVSYPLLKGNNFSYPTQYMVTLTGVSVTA
DDGTSASLGELGGSCGDGDTKGDCVPVGFDTTKYMSYLPRNVVINLAIQLNAMYSSDLQL
WIQSCAYRTIGGYLNIELTSNVFSVPISQMLMPMIDDQGNAMKFNGGEDACYLALRPSEN
NGYNSLGLGFMQNFYMVFDPDDNYVSLGTLKSQQELDTEAFKNRYPNPVKPLKPGRLSKI
ANVTTVSEQAQITFQYVPPHDVTEIITTTSNGVALQQGPLGAPVPTSANSLLVITYGSSV
MSLQGIPIGTSVLESGTVSGNARIDPTGATTRSTSSTIKPPQIQILGTPISGSLTIFRQG
SPTEAPRMAKQAPMGNSNIGAPRSGATSLLQGFGVTLGMCLIGACIIIVA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG