YALI0E25025g

Overview

Description similar to uniprot|P0CX82 Saccharomyces cerevisiae YBR084C-A (ohnolog of YBL027W) RPL19B 60S large subunit ribosomal protein L19
Locus type CDS
Locus tag YALI0E25025g

Location

Species Yarrowia lipolytica Positions 2995961..2996963
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1003 (nuc.)
Previous locus YALI0E25003g Next locus YALI0E25036g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E25025g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E25025gYALI0E25025g_mRNA-001YALI0E25025g_CDS-001

Nucleotide sequence

 

>YALI0E25025g
ATGTGAGTAGACAGCATTGGAATGGACCCCGAGCGAGAGGGATTACGATGTGGAGGAGAT
GAGGACATGACAGAGATTTTATCGACATTTCGGCGTCCATCTTTTGACGTCTTCTGAGAT
TAGAGACTCCGTGGTATCCACGATCGGAGGTGTTTAATGGGGTGCGAAGCTGAGAGTGTT
TGGTGGGCACATTTTGCTACATACCTTACACTGTCCGTTTGTGCTCTCTACACTCTCTCT
ATAGCTCTTTGGCCTGTCTTGACCCCCTCTTTGCTCTTGTTGTTCCCCCTCTTTTGATGT
ATTCGCCACCAGCACCACAACACATGTAACTAACTCCAGGGCAAACCTCAAGACCACTAA
GCGACTCGCCGCCAGCGTCCTCGGCGTTGGAAAGAGAAAGATCTGGCTCGACCCCCAGGA
GCTGACCGACATTGCTAACGCCAACTCTCGACAGCAGGTGCGAAAGCTCGTGTCCGACGG
CCTTATTGTGCGAAAGCCCAACGCCATGCACTCTCGATCCCGAACTCGAGCTCTGGCCGA
GGCCAAGCGAGCCGGCCGACACACCGGTTTCGGTAAGCGAAAGGGTACCGCCAACGCTCG
AATGCCCGAGCAGGTCCTTTGGATGCGACGACAGCGAGTCATCCGACGACTGCTCTCCAA
GTACCGAGAGCAGGGCAAGATTGACAAGCACCTCTACCACGAGCTTTACAAGCTCGCCAA
GGGTAACACCTTCAAGCACAAGCGAGCCGTTGTCGAGCACGTTATCAAGGCCAAGGCTGA
GGCTACTCGAGAGAAGGCCCTCAAGGACGAGGCCGAGGCTCGACGAGTCAAGAACCGAGC
TGCCCGAGAGCGACGAGCCGCTCGAATCGCTGAGAAGCGAGAGCAGCTCCTCGCTGAGAA
CTAAGTCTTTTTTTAAAACAGATTTATTTAGAGGGAAAAAAATGTATTATGTGCATCGGA
CCCAGTCCATGAAATGTAGTGAATGATACCGTTTCAAGAATGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E25025g_CDS-001

Protein length: 189 aa.
Product: Ribosomal 60S subunit protein L19, putative

>YALI0E25025g_CDS-001 MANLKTTKRLAASVLGVGKRKIWLDPQELTDIANANSRQQVRKLVSDGLIVRKPNAMHSR
SRTRALAEAKRAGRHTGFGKRKGTANARMPEQVLWMRRQRVIRRLLSKYREQGKIDKHLY
HELYKLAKGNTFKHKRAVVEHVIKAKAEATREKALKDEAEARRVKNRAARERRAARIAEK
REQLLAEN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG