YALI0E23947g

Overview

Description similar to uniprot|P07703 Saccharomyces cerevisiae YPR110c RPC40 DNA-directed RNA polymerase I and III 40 kDa polypeptide
Locus type CDS
Locus tag YALI0E23947g

Location

Species Yarrowia lipolytica Positions 2839795..2841014
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1220 (nuc.)
Previous locus YALI0E23925g Next locus YALI0E23969g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E23947g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E23947gYALI0E23947g_mRNA-001YALI0E23947g_CDS-001

Nucleotide sequence

 

>YALI0E23947g
ATGACCAGCCTTGCTAACCGCAACATTGTCGGCATCGAGTCCGATCGAGTGACAAACGTG
ACTTCCACGGACTTCCCTGGCCACTGGCCTGGGGCCGACGACGCCTGGGACCTCGACAAG
TTCGACAAGAACCTGCAGGTGAAGATCCATTCCCTGACCGACAATTACAGCAACTTTGAC
CTGATTGGCATCGACACGTCGCTGGCCAACGCCTTTCGACGAATCATGATCGCAGATATC
CCCACCATTGCCGTCGAAGAGGTTTTCATCCACGCAAACACCTCCATTATCCAGGACGAG
GTGCTGGCCCACCGGCTGGGTCTGGTGCCTCTGGTGATCAACCCCGAGCGAATCAACGCC
CTGCCTCGAGGTCTGGACGCTTCCGAGATCGAGGACTACTACGACGACTCCAACACCTTT
GTGCTGCGGCTCAATGTCACCTGTGAGCGACTGGCCGACGGCACCATGAAGAACGCCCAC
ATCTACGCACGAGACATCACCTTTGATCCCATGGGCAACCAGTGCCAGTGGGTCAAGGAC
GAGGGGCTGGAGAACGTGTTCAAGGTCGCCAACCCCGACATTCTGATCGCCAAGCTGCGA
CCCAACCAGAGCATCAACCTGACCATGTTCTGCCATCTGGGTTTCGGACATGACCACGCA
AAGTTTTCTCCCGTGGCCACCGCCTCCTACAGACTCATGCCCACCATCACCATCACCGGT
GACATTACCGGTGACGAGGCCAAGAAGTTCCAAAAGTGTTTCCCCAAGGGCGTCATTGAG
CTGGAGGGAGGCAAGCCCGTGGTGGCCGACGCCAGAAAGGACACAGTGTCGCGAGAAGTG
CTGAGACACGAGGAGTTCAACGGCAAGGTCAAGCTCGGCCGACGACGAGACCATTTCATT
TTCAACGTCGAGTCTTCCGGAGCTCTGGAGCCCGACGAGATCTTTCTCAAGAGCGTCATG
GAGCTGCAGGCCAAGGCCCAGACGTTGAAGGCTGCTGTGAGTGGATACATGCAGCAGTAA
GTGAGCTGGTCGAACCGCTAATGAGTAACACGCGCACCCAAGAGCGTAGCTGTTGATGGA
TCTTGTTGATGGTGTACATTGGGGGTACTTGCACGAAAAAGGCTGTCATTACACTGAGCT
CTGTTCTACTACTAGTAGGATGGAAGGAGAAGGGAAAAGGATATATAGAGGAGGACTAAT
TGATAATGTAGCATATGTTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E23947g_CDS-001

Protein length: 340 aa.
Product: RNA polymerase subunit AC40, putative

>YALI0E23947g_CDS-001 MTSLANRNIVGIESDRVTNVTSTDFPGHWPGADDAWDLDKFDKNLQVKIHSLTDNYSNFD
LIGIDTSLANAFRRIMIADIPTIAVEEVFIHANTSIIQDEVLAHRLGLVPLVINPERINA
LPRGLDASEIEDYYDDSNTFVLRLNVTCERLADGTMKNAHIYARDITFDPMGNQCQWVKD
EGLENVFKVANPDILIAKLRPNQSINLTMFCHLGFGHDHAKFSPVATASYRLMPTITITG
DITGDEAKKFQKCFPKGVIELEGGKPVVADARKDTVSREVLRHEEFNGKVKLGRRRDHFI
FNVESSGALEPDEIFLKSVMELQAKAQTLKAAVSGYMQQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG