YALI0E23925g

Overview

Description some similarities with uniprot| I2K0V1 Dekkera bruxellensis adhesion and aggregation factor
Locus type CDS
Locus tag YALI0E23925g

Location

Species Yarrowia lipolytica Positions 2837281..2838658
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1378 (nuc.)
Previous locus YALI0E23881r Next locus YALI0E23947g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E23925g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E23925gYALI0E23925g_mRNA-001YALI0E23925g_CDS-001

Nucleotide sequence

 

>YALI0E23925g
ATGCACCCATACTACCCTCCCCATGACGGGTACAACTACGACGAGGCTCCCCGACTGCCG
CTACCGCGACTTCACAAACACGACGACCACATGCACACCGTCATGAACACAGACAGGCCC
TCTCTCAAACGCTCGGCAGACCAGCTGGACCACACCTCCCAGACAGCCACAGATACCCCC
CGCTACTACAAGGCGCATTCGTCGATAGCGCTGGTGACGGACGTTAATCGAGATGCCGAA
GGCAATCCCATTGGCCCACCACCCACGCCGACAGCCAATGGCTCCCAAACTCCGCCCCTA
GTGCTCCCTCTCACCTTATCGCTACCCCCTCTGGCGGCCGCTGTGCCCCCCAACATGCAG
GTGATGCGGTCGGCCAACTCGGACCGTCCCAAAAAGAAGTCCAAGTACTCGTCCGAGCAG
GACAAAATCATTCTGAGCATGAAAAAGGCCGGCAAGGGATGGCACGAAATTGGCGAGGCT
GCACACTGCGACAACGCGCTGGCCGCCCGAAACAGATACCAGGTGCTCATGGGCCAACAA
GGCTCCGGATCGGTCTACTGGGACCCCGAGGACAACATGGGTCTCAAGGCGCTGCTGGAC
GACGGCGAGCGGGCCAAGTGGGAGTTTGTGGCGGCCGAACTCAGCAAGATCCGCCGCAAA
AACATCACCTCACCGGTCGTGCGGGCCAAGGTCAGAGACATGCTGTTCAAAAACAGCATT
CTGTTCAAGGTGGTGTTTGAAAACCGCGACGGCCACTTTGGCGACACTTGCATCCAGCCG
AGCGGCCCTACAGCCACGTCGACAGCCACGGTCAACTCGTCGCTGTCATCCCTGTCTACC
TCCATGCCTGCTCCTTACGCTCAGCCCTACTACCCTGAGTACTACTACGACGAGCAGCAG
GTACAGCAGAGCATCCAGAGCGTGCAGAATGTGCAGCAGACGGTCCAGCAAACTGTGCAG
CAGAATGTGTATGGACAGACCACACAGGTACAGCAGACACAGGGCCAGAGCACCCAGCCT
TTGGATGATTACTCACAGTATCACAAGGCGTATGCTTTCAGGCGATGAACCACGTGCGGG
GGCGTAATTCGTTCACGATGACCGAGGAAAAAAGGAGGACATGAGGAAAATCTCGAAAGT
GATGCAACTATGGATATGATATGACTGGACAGGTCATGAAAAAAACGGATTTCATATGGG
TTACCTACTTTGGCGTTTCTGGAGGGGCAAGGCGGTGTTAGAAAGCAGAGACGGGCGCGT
TTGTTTTTTAGCGCCTTGTCCGAAAAAACACCAGTATACCCGGGTGCTACTGTACAAGTA
GCCCGGGCTTTTTATTTTAATGTGTACATTTAATGCTAACGGTTTTGTTTTGGTGTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E23925g_CDS-001

Protein length: 356 aa.
Product: Conserved hypothetical protein

>YALI0E23925g_CDS-001 MHPYYPPHDGYNYDEAPRLPLPRLHKHDDHMHTVMNTDRPSLKRSADQLDHTSQTATDTP
RYYKAHSSIALVTDVNRDAEGNPIGPPPTPTANGSQTPPLVLPLTLSLPPLAAAVPPNMQ
VMRSANSDRPKKKSKYSSEQDKIILSMKKAGKGWHEIGEAAHCDNALAARNRYQVLMGQQ
GSGSVYWDPEDNMGLKALLDDGERAKWEFVAAELSKIRRKNITSPVVRAKVRDMLFKNSI
LFKVVFENRDGHFGDTCIQPSGPTATSTATVNSSLSSLSTSMPAPYAQPYYPEYYYDEQQ
VQQSIQSVQNVQQTVQQTVQQNVYGQTTQVQQTQGQSTQPLDDYSQYHKAYAFRR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG