YALI0E23969g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0E23969g

Location

Species Yarrowia lipolytica Positions 2842183..2843511
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1329 (nuc.)
Previous locus YALI0E23947g Next locus YALI0E23991g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E23969g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E23969gYALI0E23969g_mRNA-001YALI0E23969g_CDS-001

Nucleotide sequence

 

>YALI0E23969g
ATGGTCGCCGCAAAAATCGTCTTTTCCACAGCGCTGCTGGCGCTAGTGGCCGGCGCCGCC
ACCGATGCAACCTCCAACAACGTTGCAGACCTCATGCAGAAAATTGTCGAGAAGGACGCT
GTCCCCACCATCACAGACCACAGAGAGCCCCCGTTCGTGGTTGTTGAGAAACGACAATTC
CAGGGCAACCAGGGTAACCAGGGTAACCAGGGTAACCAGGGAAATCAGGGAAATCAGGGC
AACCAGCAGAACAACGCCACCTCCTCCATCCCCACCAACTCGGGCTCTTCCCAGGCAGGA
GGCTTTTCTTCTAGCTCATCCCCGGGCTTCTTTTCATCCACGGAGATTTCTTCCACCGAG
TCTAGCTCTTTCGCCGAGTCCACTTCCTCCGAGTCCTCCTCCCGGTTTGTGCCCTCATCC
ACCTCGACCTCCTCGGAGAGCTCCAGCTCTGAGATCTCTACGTCGACCTCCTCTGAGAGC
TCCTCTACCACCGAGTACTCTACCACCGAGTCCTCCACCACCGAGTCCTCCTCCACCACC
GAGTCCTCAACCACTGAGAGCTCCACGTCTGCATTTGTCCCCGTGCCTACCACGGAGTCA
TCCTCTGAGGCTTCTTCCTCTGCTTCTCCCTCTCCTACCTCGACAGAGTCCTCGGCCTCG
CCTTCTCCCTCCACCACAGAAGGCCCCTCGTCAGAGTCTTCCACTGAAGTCACTTCCGAC
GCCGTGGTGTCGTCCACCCTAATCGACGCGTCCGGCGGCCGAACCACCGTTATCATGACC
CTCACAAACACAAAGGTGACCTACGTCGGGTCCACAACCACTCTGCCTGTGGAGACCCCC
ACCGCAAGCGGAGTCACTGGCAACAACAACAAGTCTACGGGCTCGACCTCCCACACGGGC
CGAAACGTCGGTATCGGTGTGGGAGTGGGTGTTGGTGTACCTGTTGTGGCAGCCGTCATT
GGAGGTCTGTGGTGGTGGCGACGAAAGCGAGGAGGAGACACCCCCATGTACGACAAGGAC
GATCTCATCAGCGGAGGCGAGGACTCCAACGTGTTTCGATCCAACATTGACCAGTACCAT
GCGCCTAACCGGGCCAACTCCGCAGCGAACTTTTAAGCATGAAGAGTTCCACTCGAGCGC
TTCCTTCCTTTCTTTCGCCTGCATGACATTGCGACCCAGTCTGATTGATTCAGACTGTCG
GTCGGCTTTGGACCACTTTGCACTTTGCACATAGCTAGCCCAGCACATTAAAATACCCGG
CACGTTACCCTTGCTTAACTGACCTAGTCAGTGGCTGTATTCAGTTAATAGATGATTTAT
GATAGACTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E23969g_CDS-001

Protein length: 372 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0E23969g_CDS-001 MVAAKIVFSTALLALVAGAATDATSNNVADLMQKIVEKDAVPTITDHREPPFVVVEKRQF
QGNQGNQGNQGNQGNQGNQGNQQNNATSSIPTNSGSSQAGGFSSSSSPGFFSSTEISSTE
SSSFAESTSSESSSRFVPSSTSTSSESSSSEISTSTSSESSSTTEYSTTESSTTESSSTT
ESSTTESSTSAFVPVPTTESSSEASSSASPSPTSTESSASPSPSTTEGPSSESSTEVTSD
AVVSSTLIDASGGRTTVIMTLTNTKVTYVGSTTTLPVETPTASGVTGNNNKSTGSTSHTG
RNVGIGVGVGVGVPVVAAVIGGLWWWRRKRGGDTPMYDKDDLISGGEDSNVFRSNIDQYH
APNRANSAANF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG