YALI0E23650g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0E23650g

Location

Species Yarrowia lipolytica Positions 2792958..2794319
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1362 (nuc.)
Previous locus YALI0E23628g Next locus YALI0E23694g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E23650g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E23650gYALI0E23650g_mRNA-001YALI0E23650g_CDS-001

Nucleotide sequence

 

>YALI0E23650g
ATGATCGGGTTCTGTGACCCTGCCCCAGAAGACTCGTACTCCACCGAGTCGTCGTCATCG
TCCACCAGTTCCGAAACCTTTGCTGACTTTGTGCAGCACCTTCTCATCCCTCCGGATATC
CGTCGAGACGACTCCAACCTATTCTCCAATCTCGAGTTTACAGAAGAAGAGCTCCACCGC
ATTCTCATGCTCAACATTGAGCGCGTGGAGAGCCAAGCTCTGGAGGCAACTCCGTATGCA
ACCAAGGGCATCCCCTGGAGCACATTCAAGCCCCGGCAGGAGAAAAACATGACCTTTGCT
TCCAAGGTCGGCCGGTGGCTCAAGTCGCTGCCCATGCATCCTCGCATCCTCATGAGTCCT
CAGGTCTACTTCCCCCAGAAGGTGAAGCGCAATCACTTCCAGCAGGAGCTGCACGAACAG
CTGTTCGAGGTGTGTTCGGTCGAGGACTCGGATGACGATGGCAGCAGCCAATGCGACGAC
ATCAAGGATATGGGCTACGAGCAGGAAAACCCAAAGTACGGCTACTGGAACGACATCAAC
ATGAGTCCGTTCCCTGTATCCTGGATCCCCCCTTCAGCTCTGTCTTCTCCACACGTCCAG
CTGTGCATCGACCAAATGGAGCCCATGGAAAATATTGGCATGTGCAAGATCATGCTATCG
ACTTCCGAGTTGCTCATGCTGCGCAATGAGTCTGCGCCTGGTGCATGTGTGGGGTCTTCC
TACCCTCTGTATCCTCATGCTACAGATTTTGTCGAGGACGAGATGTACGATCTCAAGTCA
AGAATATACACATACAATGTGCTGTATCACGCGCGTCTGGAGAGCATGATTGGGGAGCCA
GTTCGTTCTCCAGCCACAGAGCCCCCATTGCGTTCGGACACGGAGTTTCATATTCGCAAC
ATGAGTTTGGCGGACGTGGGTCTTGTCGCCTCGGCTCCCGCGTCTCTTGTTGTCTCCAAC
TACCTCCCCTACGTCTGCAGGGGTTTACCGAGGGAAAACGAGATATGGGGGAGGCGTAGT
TCTTCGTCCGTGCATTCCAGAGATTTATCTGTGTCCACTTCTGAACTGAGTGACATCACA
AACATTGCCGACATTGCCAGCATTGCCAACCGACCTACGTCGTCGAAACTGCCGTGTCCC
ATTGGCTTGGGCTCTCCATTTCGGTCCTCTCGGTCCAGACACCATTTCCGCCGCCCGTTT
GCTGGCTACGCTTCTCGCCGGGCTCGAACAGGGTTTGGTGATGTAGACGGTCCTGGCCCC
AAGAAGGTCAGGGTGGACGAGGATTTGGGACAGTGTGGGGAGGTGGAGCTTCTACGCGGC
CCCGAGAGTGCTGGTTCGTCTACGTTCATGCTTCCCCATTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E23650g_CDS-001

Protein length: 454 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0E23650g_CDS-001 MIGFCDPAPEDSYSTESSSSSTSSETFADFVQHLLIPPDIRRDDSNLFSNLEFTEEELHR
ILMLNIERVESQALEATPYATKGIPWSTFKPRQEKNMTFASKVGRWLKSLPMHPRILMSP
QVYFPQKVKRNHFQQELHEQLFEVCSVEDSDDDGSSQCDDIKDMGYEQENPKYGYWNDIN
MSPFPVSWIPPSALSSPHVQLCIDQMEPMENIGMCKIMLSTSELLMLRNESAPGACVGSS
YPLYPHATDFVEDEMYDLKSRIYTYNVLYHARLESMIGEPVRSPATEPPLRSDTEFHIRN
MSLADVGLVASAPASLVVSNYLPYVCRGLPRENEIWGRRSSSSVHSRDLSVSTSELSDIT
NIADIASIANRPTSSKLPCPIGLGSPFRSSRSRHHFRRPFAGYASRRARTGFGDVDGPGP
KKVRVDEDLGQCGEVELLRGPESAGSSTFMLPH*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG