YALI0E23694g

Overview

Description some similarities with uniprot|P05750 Saccharomyces cerevisiae YNL178w RPS3 ribosomal protein S3
Locus type CDS
Locus tag YALI0E23694g

Location

Species Yarrowia lipolytica Positions 2797044..2797841
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 798 (nuc.)
Previous locus YALI0E23650g Next locus YALI0E23716g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E23694g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E23694gYALI0E23694g_mRNA-001YALI0E23694g_CDS-001

Nucleotide sequence

 

>YALI0E23694g
ATGTCCTCCACTGTCACCATTTCCAAGAAGCGAAAGATCGTCGCCGACGGTGTTTTCTAC
GCCGAGCTCAACGAGTTCTTCACCCGAGAGCTCGCCGAGGAGGGATACTCCGGCGTCGAG
GTCCGACTCACCCCCACCAAGACTGAGATTGTTGTCCGAGCCACCCACACCAACAAGGTC
CTTGGTGAGAACGGCCGACGAATCCGAGAGCTCATGTCTCTGGTCCAGAAGCGATTCCGA
CTCCCCGAGGGATCCGTCACCATCTACGCTGAGCGAGTCCAGGAGCGAGGTCTGTCTGCC
GTTGCCCAGTGCGAGTCCGTCAAGTACAAGCTGCTCAACGGTCTGGCCATCCGACGAGCC
GCTTACGGTGTTGTCCGATACGTCATGGACGCCGGCGCCAAGGGTGTTGAGGTTGTTGTT
TCCGGAAAGCTGCGAGCTGCCCGAGCCAAGTCCATGAAGTTTGCCGACGGTTTCATGATC
CACTCCGGTCAGCCCGTCAACGACTTCATTGACACTGCCACCCGACACGTTCTGCTGCGA
CAGGGTGTGCTCGGTGTCAAGGTCAAGATCATGCGAGACCCCGCCACCTCCAAGAAGCCC
GGTGTGCCCAAGTCTCTGCCCGATGCCGTCACCATCTTCGAGCCCAAGGAGGATGCTGTT
GTTGCCGAGCCCATGGTCAAGTCTTACGTTGTCAAGACTGAGGTTGCTGCTCCCGCTGCT
GCCGAGCCCGTTGAGGCTTAAGTCTGATTAGGCAAATAGTCAAAATAAAATTATTCGTTA
ATCCGCCATGATGGATTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E23694g_CDS-001

Protein length: 247 aa.
Product: Conserved hypothetical protein

>YALI0E23694g_CDS-001 MSSTVTISKKRKIVADGVFYAELNEFFTRELAEEGYSGVEVRLTPTKTEIVVRATHTNKV
LGENGRRIRELMSLVQKRFRLPEGSVTIYAERVQERGLSAVAQCESVKYKLLNGLAIRRA
AYGVVRYVMDAGAKGVEVVVSGKLRAARAKSMKFADGFMIHSGQPVNDFIDTATRHVLLR
QGVLGVKVKIMRDPATSKKPGVPKSLPDAVTIFEPKEDAVVAEPMVKSYVVKTEVAAPAA
AEPVEA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG