YALI0E22880g

Overview

Description weakly similar to uniprot|P50946 Saccharomyces cerevisiae YNL099c
Locus type CDS
Locus tag YALI0E22880g

Location

Species Yarrowia lipolytica Positions 2700749..2701615
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 867 (nuc.)
Previous locus YALI0E22847g Next locus YALI0E22902g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E22880g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E22880gYALI0E22880g_mRNA-001YALI0E22880g_CDS-001

Nucleotide sequence

 

>YALI0E22880g
ATGCACCGAACCAGCATTGTGGAAGAGCTGGAACGTCACCAGCAGGACCAAAAGGCGGAT
CAGGAGCCTGGCTCTGTGTCCGATGCGAGCAATTCCGCTCTGCAGGAGTCCTCCGATCCT
CGGCTCTCCACCACAGACAACACAAATACTCCCGAAATCAACGTCAACGATCAGCAACAG
GAACAGCAGGTTGCTTCTGGAGAAGACACCGACCCTCCCAGCCCACGCATGAAGACCATC
GTCAAGCCGCCGCCCATTAAGGTGGTGCCCCCGCTCAACTTTGGGCCAGTGGAGCGAAAC
CTGTACCGGTCTGGACAGCCCGAGCCCATCTCTTTCCCATTCCTTGAGAAGCTACGTCTC
AGAACGATTCTGTGGCTGGCCGTCGAGGACCCCAGCGACAACTTTCTGGCATTCGCAGAC
GACCACGAGATTGTCGTGCACCACCTGGGACTGGTCACCGAAGGAACCAACCCTTGGGAT
CAGCTAACGGAGTCGTCCATCGTGGCAGCCCTGCAAATCATCATGGACAGAGACTCGTAT
CCTTTGCTGGTGTGCTGTGGAATGGGCCGCCATCGTACAGGAACAATCGTGGGCTGTCTG
CGACGACTGCAGGGATGGAACTTGGCCAGTGTCAGTGAAGAATACCGACGATACGCGGGA
TCTCGAGGAGGTCGAGCTCTCATCGAGCTACACATTGAGGCGTTTGACACGTCGCGGATC
ATTGTGTATCCAGAAAGCGCTCCCGAGTGGTGTTCTTCGTAGCCTTACGTCTAAGGTCTA
ATCACATATTTATCTATCGTGCCTTGCTTGTCTATAACTTATAGCTTTCTTTCCATTCAA
TGTATAGTTACCGTCCCATGCTTATAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E22880g_CDS-001

Protein length: 254 aa.
Product: Conserved hypothetical protein

>YALI0E22880g_CDS-001 MHRTSIVEELERHQQDQKADQEPGSVSDASNSALQESSDPRLSTTDNTNTPEINVNDQQQ
EQQVASGEDTDPPSPRMKTIVKPPPIKVVPPLNFGPVERNLYRSGQPEPISFPFLEKLRL
RTILWLAVEDPSDNFLAFADDHEIVVHHLGLVTEGTNPWDQLTESSIVAALQIIMDRDSY
PLLVCCGMGRHRTGTIVGCLRRLQGWNLASVSEEYRRYAGSRGGRALIELHIEAFDTSRI
IVYPESAPEWCSS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG