YALI0E22902g

Overview

Description some similarities with uniprot|Q99394 Saccharomyces cerevisiae YOR115c Trs33p TRAPP subunit of 33 kDa involved in targeting and fusion of ER to golgi transport vesicles
Locus type CDS
Locus tag YALI0E22902g

Location

Species Yarrowia lipolytica Positions 2701532..2702178
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 647 (nuc.)
Previous locus YALI0E22880g Next locus YALI0E22913g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E22902g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E22902gYALI0E22902g_mRNA-001YALI0E22902g_CDS-001

Nucleotide sequence

 

>YALI0E22902g
ATGGTTTCGAGCACAGCACTGGAGCTGCTGCTGGCAGAAGTGGTCCCTGCAGCTCTCCGA
GTGTCGCAAGAATTGACAGAGCCGGAAGAGGGCTCCAAAATGGCTCCGTTTGGATACTTG
GTGGACTCGGAAAGCCACTTGGACAACGTGTACTTCCGGGTGGAGGGATACGGATACCGT
GTGGGACGGGGCATCGCCGAGAGCTTCTCCAACGAACGACCACACTTTGCAGATACGCTG
GACATGATGAAGTTCATCTGCAAAGACGTGTGGCTGTTGCTGTACAACAAGCAGGTGGAC
CATCTCAAAACCAACCACAGAGGCACGTTTGTGTTTGTGGAGAACCAATTTCGAGGCTGT
CAACGCATGAGTGCCAAGGGAGGCCAGGTCGAGACCATGAAGGGGGCTACTCCGTACCTG
TGGTTCCCCGTGGGTGTCATTAGAGGAGTTCTGGCCGCTCTGGGAATCCAGGCCGACGTG
ACGTTTGAGACCACTCAGTTGCCGGTGGTCTACTTCAACATTCACGTTGTGCAGTGATAC
AACATGGGTACAAGTTAACAAGGGTATAAGCATGGGACGGTAACTATACATTGAATGGAA
AGAAAGCTATAAGTTATAGACAAGCAAGGCACGATAGATAAATATGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E22902g_CDS-001

Protein length: 179 aa.
Product: Conserved hypothetical protein

>YALI0E22902g_CDS-001 MVSSTALELLLAEVVPAALRVSQELTEPEEGSKMAPFGYLVDSESHLDNVYFRVEGYGYR
VGRGIAESFSNERPHFADTLDMMKFICKDVWLLLYNKQVDHLKTNHRGTFVFVENQFRGC
QRMSAKGGQVETMKGATPYLWFPVGVIRGVLAALGIQADVTFETTQLPVVYFNIHVVQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG