YALI0E22847g

Overview

Description some similarities with uniprot|P40494 Saccharomyces cerevisiae YIL095W (ohnolog of YNL020C) PRK1 serine/threonine protein kinase involved in regulation of actin cytoskeleton organization
Locus type CDS
Locus tag YALI0E22847g

Location

Species Yarrowia lipolytica Positions 2695741..2699346
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 3606 (nuc.)
Previous locus YALI0E22825g Next locus YALI0E22880g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E22847g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E22847gYALI0E22847g_mRNA-001YALI0E22847g_CDS-001

Nucleotide sequence

 

>YALI0E22847g
ATGACGCACAAAGAGGCTCCGCCGGGAGCATATCCTCCGGGCACCCAGCTCACGGTGGGA
TCGCATGCCGTGACCATCAAAAAATACATCTCCGAGGGCGGCTTTGCGCATGTGTATACG
TGCGACATTTCGCCCGACTTTCGCGGCTCCAGCGTGGCCTGTCTGAAGCGGGTTGCCGTC
CCCGACAAGCCCAGTTTGAATCTGCTTCGATGCGAGGTGGACGCCATGGTGAGTAGCATT
AGGGGGGTGATGAAAGCAGAATGTGGGCAGCGTGGGTTGGAACATCGTGGGTAGGGTCAG
CGATGGCGATTACCGTGAATGAGTGATGAAGGGGTGACAAACGTCTGAGTAAATGAACCG
CTGAACGACCGAGTGGTTTTTTAATGACAAGAACTGCTTCAGATGCCTGGATAACGACCA
CGGACCGACAATGGGGGTTACAAGAACGATGGTATTTGGAACACAACCGCTGCCACCAAC
TGTTGCCACTACACAACGCTGTTTCCATCCGCTCTCACTCAACGCACCACACACAACGCT
GTCACCAACATATCTGTTACACTACATACTAACCCAGAAACGACTGGCAGGAAACGAATA
CATTGTGCAGTACATCGACTCGCACGCAGCCCGCAACTCCAACGGCCCCGGCTACGAGGT
CTTCCTGCTCATGGAGTACTGCTCACGAAACGGCCTGATTGACTTTATGAACGAGCGGCT
ACGAGAGCGGCTGTCTGAGGCCGAAGTGCTCACCATCGGCAGCAACATTGCCGAGGCCGT
CTTCTGCATGCACTATCTGGACCAACCGCTACTGCATCGAGATCTCAAGATTGAAAATGT
TCTTATCAGCGGCGACGGCAAGTTCAAGCTGTGTGACTTTGGATCCGTTTCCCCAGTGCT
GCGGCCACCACGAAACCAGATGGAGTTCCGCATTCTGGACGACGATATCCAGCGACACAC
AACCGTTCAGTACCGAGCGCCCGAGATGATTGACATTATGCGGGGCTTCCCCATTGACGA
AAAGTCCGACATTTGGGCTCTGGGAGTCTTCTTTTACAAGCTGTGCTACTACATCACACC
CTTTGAACAGCAGGGTCAGCTGGCGGTGCTCAACGCGCAGTTTTCGTTCCCGCAACAGCC
ACACTACTCGGATGGCCTGAAACACCTCATCAGCGTGCTTCTACGAGAAGACCCCCGAAA
CCGGCCAAACGTTTACCAGACCATCCAGGAGCTGTGTCGACTGCGCAACGTGCCTGTGCC
CGAACACATCACACAGACGTACTACAAACGCAAGGAGGAGCGAAGGCTGGCGTTAGAACA
GTGTCAGCCTATGGGACAGCCTGCAGGATCTGTGCAGCAGCCCTCTTCTTCGGCTATTCC
TTCTCCTCCAGTCCAGCCTTCTCCTCCCCTGCTGGCCCAACAAGCCTCGGCTGTGGTTGG
AGCTGGAGCTGGAGCTGTTCCAGTGCAGGCATCTTCACAGCTGGAGGTCCCCGCGGGACA
TTCTCGGAATGCAAGCCAAAGCAGTCTGGAGGCGTTTGATCCCGATGAGGCCGCAGCCCG
GTACCCTACAGTGGAGGAAATCACGCGGTCGTTGGAAAGCAACAATCTGTGGGATATGCC
ACCGTCGCGAGGCGTGTCTGAGCATGCTTCTGCACGAGCCACCCGGGACAATTCGTACGA
CATTTCTCGAAACTCAGTGCCTCCTGCTACTTCAGCCCCCGCACCCGTGCCGTCCATGCC
TGTTCCTCCGGTACAAGACACACCCCAACTGTCTCCCCAGACGGCACCCGCTTCTCTTTC
CAACAACATCAACATCAACAGCAACAGCAACAGCAACAACAACGACGTCTCTGCGCCTGT
GAACATTCCATCGTTCAAAGCCAAGAGTGCATCTCCCCCTGTCCAGTCATACAAATCCAA
CAATCCATACCTTGAGGATGCGGCAGCCAAGTACTCCGCTGCCGCCTCTGCCGAATCGTC
TACCCACCTGGCAGGAGTTACTGTGTCTTCCGAATCGTCCGATGACGGAGGATACTACCA
GCCGAAGGTTGATCGAAGTTATCGGGATGAGTTTTCTGCCCCAGTGTCATCTGCAGCGAC
ACCTATGGCTGTTCCGGTGGCTACTGCTTCTGCTGCTGCTGCTAAACCTCCCAAGCCTCT
GCCCCAAATTCCGGTTCAAGCTTCGCCCACCAACACCATGCCTCCTCCTCGAAAACCTGC
CCGGCCAAACTCCCTGTACATGCGACAAAACTCGTCACGTGCGTCCATCGTGTCCGATCA
TGGAGGTGAGGACGTGCCCCAGTTCCAGTACACGGACTACTCAGGTACTGCCCCCACTGT
AGCTACCGGGAAGCCGCTCAACGACCACGACGAGCTGCAGGCCATTCTCACCGGTCTTTC
GGAGCACGAAACCACCGTAGTGTTGGACGACCGCACACACCACCACATTGACTCGTCTGT
GGACTTTCTGCAGGACCAGCAGCATCGCGAGGGCAGCAGCAGCTGGAAGCTGTTCCGCAG
CCTCAGCAGCGGCTCCAAACAGGACCTGTCGTCACCCCAGGGTTCCCACGACCATAGACG
ACGGCGCAGCATCAACAAGATGCTCCACCGACACCACCGACACAAGCGAGAGAGCCAGGA
GTACGGCGGCAACACGGACACCGACGAAGACAGTGCCGACGAACATATGCCCACCATGGA
AAAGGCCTTCAATCTGAATGTACCCAAGCGCAACAATCGGTGGAGCAAGTCGTTTGAGTC
GCTGAGCAAGCAGGAGGGCGTGTCTGACGACGAGGATCACCTGCCCGAGCGACGGTCACG
CCGGTCCATGGACGAGCGCCATTCACGACACGACACTTCTGCTACTTCAAGGAGCAGAGA
CGGAGGTCGAAAGTCACTAGACGCGCAGCGGTTCGAGATGCGCCAAGAGGAGCTGCGAGC
CCATGCCAAGGCCAATGTTGCTAATGCGGCTGGTGGCTCGTCTTCTTCTTCTTCGGCCGC
TCAGGCTGCTGCCCAAGCTGCCGCTTCCAAAGCTGCCACCTCCCCCCCAGTGACCCGAAA
AAGTCTGGATCTCAGCCGAGTGGAGTCGCGGGTGGACGAAGACAGCGGCAGTAGTCGATC
ACGTGAGCGGGAGCATCACAAACACAAGCGGTTCTCGCGAAGCGGCTCGATCCAGGGTCG
GATTCATGCTCTTATCAACCGACGACCCTCGCCTCCCCGAAAAACCGCCTCTGGGTACGG
CAAGTACACCGAGAGTGAGTCTGACGGTGGCGGCGAAGATGGGGGACTAGCCCCAACAAA
ATCGGTGCCTGCGCGTGTTAACACGGCTCCTGCTCGAAGTGCACCTCCCATTCGAGTGTC
GACTGACGAGCGAGCTCCTCCGCCGCGACCTTCGCCCAAGCCAGTGCATCTGCAGTCGCC
CAAGTTGTCGACTGCTCCTGATAAGCCTGATCTGCCCCCTCGAAAGCCCGTCCGAGTCAT
GACCGAGGACGATGACTGGAAGGCCAATTTTAATGAGAAGTATCCTTCGTTAGGATGAAG
ATTGAGGATGACACGAAACAATCATATAGAGCATAAACCGATTATTAATGACGAGCGTAG
GGAATC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E22847g_CDS-001

Protein length: 1063 aa.
Product: Conserved hypothetical protein

>YALI0E22847g_CDS-001 MTHKEAPPGAYPPGTQLTVGSHAVTIKKYISEGGFAHVYTCDISPDFRGSSVACLKRVAV
PDKPSLNLLRCEVDAMKRLAGNEYIVQYIDSHAARNSNGPGYEVFLLMEYCSRNGLIDFM
NERLRERLSEAEVLTIGSNIAEAVFCMHYLDQPLLHRDLKIENVLISGDGKFKLCDFGSV
SPVLRPPRNQMEFRILDDDIQRHTTVQYRAPEMIDIMRGFPIDEKSDIWALGVFFYKLCY
YITPFEQQGQLAVLNAQFSFPQQPHYSDGLKHLISVLLREDPRNRPNVYQTIQELCRLRN
VPVPEHITQTYYKRKEERRLALEQCQPMGQPAGSVQQPSSSAIPSPPVQPSPPLLAQQAS
AVVGAGAGAVPVQASSQLEVPAGHSRNASQSSLEAFDPDEAAARYPTVEEITRSLESNNL
WDMPPSRGVSEHASARATRDNSYDISRNSVPPATSAPAPVPSMPVPPVQDTPQLSPQTAP
ASLSNNININSNSNSNNNDVSAPVNIPSFKAKSASPPVQSYKSNNPYLEDAAAKYSAAAS
AESSTHLAGVTVSSESSDDGGYYQPKVDRSYRDEFSAPVSSAATPMAVPVATASAAAAKP
PKPLPQIPVQASPTNTMPPPRKPARPNSLYMRQNSSRASIVSDHGGEDVPQFQYTDYSGT
APTVATGKPLNDHDELQAILTGLSEHETTVVLDDRTHHHIDSSVDFLQDQQHREGSSSWK
LFRSLSSGSKQDLSSPQGSHDHRRRRSINKMLHRHHRHKRESQEYGGNTDTDEDSADEHM
PTMEKAFNLNVPKRNNRWSKSFESLSKQEGVSDDEDHLPERRSRRSMDERHSRHDTSATS
RSRDGGRKSLDAQRFEMRQEELRAHAKANVANAAGGSSSSSSAAQAAAQAAASKAATSPP
VTRKSLDLSRVESRVDEDSGSSRSREREHHKHKRFSRSGSIQGRIHALINRRPSPPRKTA
SGYGKYTESESDGGGEDGGLAPTKSVPARVNTAPARSAPPIRVSTDERAPPPRPSPKPVH
LQSPKLSTAPDKPDLPPRKPVRVMTEDDDWKANFNEKYPSLG*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG