YALI0E22572g

Overview

Description weakly similar to uniprot|P08640 Saccharomyces cerevisiae YIR019c STA1 extracellular alpha-1, 4-glucan glucosidase
Locus type CDS
Locus tag YALI0E22572g

Location

Species Yarrowia lipolytica Positions 2658562..2663420
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 4859 (nuc.)
Previous locus YALI0E22550g Next locus YALI0E22605g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E22572g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E22572gYALI0E22572g_mRNA-001YALI0E22572g_CDS-001

Nucleotide sequence

 

>YALI0E22572g
ATGCACCAATTACTCATTTTCATTCTGCTAGCTGCTCTGGCTCTCGCCAAGCAAGTTCCC
AGCCCTCTCGGGTCTCTGGATGTCACCAGAGCCTCCGACGGAGGCAAGAAGGGAACCACT
AACGATGTCTGGAACATGAACTTCTCCTTTTCTCTCAAGCCTTTCGCTGACAACATCCAG
CCTGGAGACTATTTCAAGTTCACAGTTGATGACAAGCTCAGCTTTGGACTAAACAACTTC
AACTTCGATGTTAAGGACGCTGACGGAAACGTCATTCTCAAGATCACAAACAACGGACCA
GTCTTCACCGGTACCTACACAGACTACGTGGCCACCAAGAACGACGCCATTTCAGGTGCC
GTCGACATTCAGACGCTTTTCGACGCCAACAAGATCAAGACTACAGGTCCCACCACCGTA
ACAGTTACTCCTCAGGTTGGTGGCCCCACACTCAAAGACACTGTCACTCTTCTGGGTACT
ACAAACCCGGATAATGCCCTCAAGTGGGGAGAGTTGAACGGCTGTTGTCTTGTTCTCTGG
CATCTTCGACTTCCCACTTCGCCCTACAACCGGGCTGAGATCACTGACACAAGATCCGAT
GGCAACACCGAATTTTTCGACCAGGGCACCCTCATGGCCAATACCCGTCTGATTTTTAGG
TACAACCTCAATGATATGGGTGGCTTCTCCAAGCAGGAATGGGTCCTGGGTTCAAACGTG
GCCAAGTACCTTACCTACACCTCGGTGACACCCAAGCAGTTCACTGCCCGCCTGGAAAAC
ATTCCCGACAATGTTTCTGTGGAGATTCAATACTTTTCACGAATCACCAACCAGGCTTCC
CTCTACAAGAACTCTTACTCATACGTTCTGTATGACAAGCCTCCTGGCGGTACTGGAGGA
AATGAATGGACACGACGAGGAAACGGAGGTGGATATGCCACCAACCAGCAGCCTGGAAGC
AACATCCCCAGCCTCAACGGAGGAGGATCTGGATCTGGATCTGAAAGATGTGAGTATGAG
AGACGGAGAGAGATGGATTTTTGAGACATGAAACTGACATAGCCACCACTTCATCCAAGC
CTACTTCGACTAGTGTGAAGACAACGAGTACAACTCCCACTGTGACTGCTACTCCCACAA
CTAGTACTTCATCAACGAGCGCCACCCCTACCACAAGCACCACACCTACCACGTCGGCCA
CTCCCCCTGCCGCTACGACTCCAAACACAAGCTCAACCCCTACAACCAGCTCTGATCTCA
TCACCTCTTCAGTGTTTGAGTCTTCTACCGGGTCCATTCCTCAGAGCATATCTTCCGTCG
AGTCTTCTGTGGAGCCGTCATCTACTGGGCCCATTTCTGAAAGTACACCAGTGGGGCCCT
CTTCTTCTGTTGAGTCGTCTCCATCGGTTGAGCCTTCTTCTGAATCTTCTGTGGGGCCCT
CTACAAACGAGCCTATTCCCGAGACAACTTCTGAGGTCCCTTCTTCAGTCGAGACTGTTG
AATCTACCCCTGAATCCACCACCGAGGCTTCTACGGAGTCGGTGGAGCCTTCCTCCACAG
AGTCATCTACAGATCCCGTTCCCGAGTCTACCACCGTTTCCGTTACGTCAGACCCTACCT
CGGAACCCTTTCCGGAGACCACTTCAAGTGATCCTGAGATTGCTCAGAACGATTCTTCGA
CCGTCGGACCCTCCACCACCGAGGAGTATTCAGTCGAGCCCACTCCTGATTCCACCTCTG
AGGCTCCCCAATCGGCCTCTGGGACTTCTGAATCGTCTACTGAGTACACTTCGGAAGCAG
TCACTCCATTTCCTACTCCTTCGTCTGAGACTACTTTCATCAACTCAACTACGAGTGAAC
CAGGCACCACTGAGTCCCTCTCTACCTCCGAGTTGTCTACAGAGGCCACAGTGGAGCCTT
CCACGGAGTCCACTTCGGAAGCTGTCACTCCCTTGCCTACTCCTTCGTCAGAGACTAGCT
TCATCAACTCGACTACGAGTGAGCTAGGTGCCTCTGAGTCTACATCGGAAACTGCAACTC
CCCTACCTACTCCTTCGTCAGAGACTAGCTTCATCAACTCGACTACCAGTGAGCTAGGTA
GCACAGGTTCCACTCCAGAAACTGTCACTCCCTTGCCTACTCCCTCGTCAGAGACTAGCT
TCATCAACTCGACTACGAGTGAGCTAGGTGCCTCTGAGTCTACATCGGAAACTGCGACTC
CCCTACCTACTCCTTCGTCAGAGACTAGCTTCATCAACTCGACTACCAGTGAGCTAGGTA
GCACAGGTTCCACTTCGGAAGCTGTCACTCCCTTGCCTACTCCCTCGTCAGAGACTAGCT
TCATCAACTCGACCACCAGTGAGCTAGGTACAACGGAGTCCACTTCGGAGGCTGTCACTT
CCCTGCCTACCCCCTCGTCTGAGACTACTTTCATCAACTCGACTACGAGTGCGCTAGGTA
CCACTGAATCCACATCCGAAACTGCAACTCCCTTGCCAACCTCCTCGTCAGAAACGGATT
TCGCCAATTCGACTACCAGCGAGCCAGTTATCACTACGTCTCCTCCCACCTCAGAGTCTC
CCGTGACTACCGATTCTCCTTCGACGGCGAGCAATGAGTCTGTGATTCTTGATGGTTCTC
TTACTTCCGTAGGGTTCCCCAACAGCACTACCGTTGTCTCTCAGAATTCGACCACTGAGC
TCGAGTCTTTCACCGAGTCCTCTGTTGCGTCTTACATTACTGGGACTTCGGCTGAGCCTA
CTCCCGAGTCGTCTTCTGTAGATCCCTCTAGTACTGAAGCCGAGTTTTCTTCCGTCGGGC
TGACCCCTGAGGCATCTTCTATCAAGGAGTCTTCTTCGGCGACATCTTCGGTGGAGCCTA
CTACTGAGCCTACAACCTCTACTACTGAGCCCCCCGCCGTGTTATCCAGCGTGCCGATTT
CAACCTCGATGAATGTTACATTCCAGTCTTCTTCAAGCTCATCCGTTGCAGTGACTTCCC
AGGAGGAATCATCTACCATTTCTTCTGCCGAACCCACCACCACAACTGGTCCCGTATTCT
GCGAGCGAGATGGTAACGATGATGGCTGCATTATTCTTTCAGCTTCTAGCTCTAAGTCGT
CCAGCGATGTTTCTTCGGAGACTCCTAGGGCTACCACTGCTTCCGTGTCTTCAGAGTCCT
CTGGAACTGCTTCCACTGACCCTGCTGTCCCTACCACGGAATCTTCGGTCGAGGCCCCTT
CTTCAATCGATACTTCTGTCCAGCCTACTTCAATGGAGACTCAAACACTGTCCTCTGAGA
CTTCCCAGTCTGCCACAGCCACTGAGTCTTCTACTCCTCTGACAACTGATTCAGCCTCAT
CTACTCACGTTTCAAGCTCTTCCTTTGCTACCCCGAACGTGAACAGCTCTGCTATTTCAG
TTACTGAGTCTACCGAGTCTGCAACCGCCTCTGTCACTGATTCTACAGCCACCACAGCGG
TTGTTGTAACCACCATAGAGCCTTCCAGTGCCTCTGCAGTTTCTTCAGAGTCTGCCTCTG
CGTCGCTCACTTCCTCGGTACTGGCCACCCAATCTGATTTCAACTCTACCTCCAAGTCTG
TAGCCTTTGCTACCACTTCGACTTTGGTTTCAGAGTCTGTTACTCAGTCTCTGACTTCCA
AATCAACTCAGTCTTCCGTGCCAGTCTCCCAGTTCTCTCAGCACGTCTCTAACTCGACCA
TCTCAGACTCCTCTGTCATTTCTGGAACCGCCTCAGTGCCTGAGTCTGCTGCTAAGTATA
CCACCACCGATTTCTCGAACACCATTGGCTCTGGTACAGTGACTGAATCAAGAATAGTGT
CTGATAATGCTTCTAGATCGGACGCTGCCACTGCTTCGGGTTCCAGCGTTGCTTTTTCGG
GGACTGTGACTGAGGCCTCATCCACATTCTCCGAGTCTGGTCTTGCTTCGAATACCCGGC
CTGCTCCCATCGTCACAACTCTGACTCAGACTGTCACTGCTTGCAGCAACAACCAGTGCT
CGAAGACCACTGTCACCGTGACTACGGCAGTCCCCACCAACCATGCTACCATCACTAAGC
AGACTGTGATTGACGGCAACACCATGACTGTGTCTGTTCCTGTTGAGAGTGGCTCTGGTA
ATGGTTCAGATGAGACTGAATCGTTGTCCTATCTTAACCCATCTCTCACCACCACTCTCA
CCCAGAACGTTACTGCTTGTGACCAGGAAAACTGCACGGAGATTCCAATGACCATCACTA
CGGTGGTTCCCACCAATGCAGCTTCTACTACCATTCAGACCGTCATTGAGGGGTACACCG
TGACTGTCGTTGTTCCTTGTGACTCGGTTGCCTCTGAGGGGGCTACGGAAGCAGTTACGC
CTGTTTCAACTGTGACTGTTTCTGAGTCTCGTGCTACTGGAACAGTCTCCGAACCTTCTG
TTCAGTCTTTGGTTCAACCTTATGCTCCCAGATCTGGTTACCAGTCTTCTGATGATGCTT
TTACACACTCTGTGCCCGCTCACTTTTCTTCTGAGTCTTCTAAATTGGCCCAGCCGTCGC
AAGCTACTGTAACGGTTGCCACTTCTGGCTCAGCTGCCAGCTCTGTTGTTTCTGGTCCTC
CAGTTGCTTCAGATTCAGTTGCTTCTAACTCTCCTGCTGCCTCGGCGCCTGGTTCAGACT
CTCCTCCGTCCGCGGTCTCGCAGCACGGCACCCAAAAGGTTGAGTCTCAGACTCCCACAC
TCTCTTTCACCCAAAGCCCGTCTCAGACACGAGTTCCGCCCCCCAACCAGGCCAACTCCG
CTTCGAGCACAAAAATAGCTGCATCTCTTCTTCTCCTTCCTTTGTTGGCTTTTATTTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E22572g_CDS-001

Protein length: 1602 aa.
Product: Conserved hypothetical protein

>YALI0E22572g_CDS-001 MHQLLIFILLAALALAKQVPSPLGSLDVTRASDGGKKGTTNDVWNMNFSFSLKPFADNIQ
PGDYFKFTVDDKLSFGLNNFNFDVKDADGNVILKITNNGPVFTGTYTDYVATKNDAISGA
VDIQTLFDANKIKTTGPTTVTVTPQVGGPTLKDTVTLLGTTNPDNALKWGELNGCCLVLW
HLRLPTSPYNRAEITDTRSDGNTEFFDQGTLMANTRLIFRYNLNDMGGFSKQEWVLGSNV
AKYLTYTSVTPKQFTARLENIPDNVSVEIQYFSRITNQASLYKNSYSYVLYDKPPGGTGG
NEWTRRGNGGGYATNQQPGSNIPSLNGGGSGSGSERSTTSSKPTSTSVKTTSTTPTVTAT
PTTSTSSTSATPTTSTTPTTSATPPAATTPNTSSTPTTSSDLITSSVFESSTGSIPQSIS
SVESSVEPSSTGPISESTPVGPSSSVESSPSVEPSSESSVGPSTNEPIPETTSEVPSSVE
TVESTPESTTEASTESVEPSSTESSTDPVPESTTVSVTSDPTSEPFPETTSSDPEIAQND
SSTVGPSTTEEYSVEPTPDSTSEAPQSASGTSESSTEYTSEAVTPFPTPSSETTFINSTT
SEPGTTESLSTSELSTEATVEPSTESTSEAVTPLPTPSSETSFINSTTSELGASESTSET
ATPLPTPSSETSFINSTTSELGSTGSTPETVTPLPTPSSETSFINSTTSELGASESTSET
ATPLPTPSSETSFINSTTSELGSTGSTSEAVTPLPTPSSETSFINSTTSELGTTESTSEA
VTSLPTPSSETTFINSTTSALGTTESTSETATPLPTSSSETDFANSTTSEPVITTSPPTS
ESPVTTDSPSTASNESVILDGSLTSVGFPNSTTVVSQNSTTELESFTESSVASYITGTSA
EPTPESSSVDPSSTEAEFSSVGLTPEASSIKESSSATSSVEPTTEPTTSTTEPPAVLSSV
PISTSMNVTFQSSSSSSVAVTSQEESSTISSAEPTTTTGPVFCERDGNDDGCIILSASSS
KSSSDVSSETPRATTASVSSESSGTASTDPAVPTTESSVEAPSSIDTSVQPTSMETQTLS
SETSQSATATESSTPLTTDSASSTHVSSSSFATPNVNSSAISVTESTESATASVTDSTAT
TAVVVTTIEPSSASAVSSESASASLTSSVLATQSDFNSTSKSVAFATTSTLVSESVTQSL
TSKSTQSSVPVSQFSQHVSNSTISDSSVISGTASVPESAAKYTTTDFSNTIGSGTVTESR
IVSDNASRSDAATASGSSVAFSGTVTEASSTFSESGLASNTRPAPIVTTLTQTVTACSNN
QCSKTTVTVTTAVPTNHATITKQTVIDGNTMTVSVPVESGSGNGSDETESLSYLNPSLTT
TLTQNVTACDQENCTEIPMTITTVVPTNAASTTIQTVIEGYTVTVVVPCDSVASEGATEA
VTPVSTVTVSESRATGTVSEPSVQSLVQPYAPRSGYQSSDDAFTHSVPAHFSSESSKLAQ
PSQATVTVATSGSAASSVVSGPPVASDSVASNSPAASAPGSDSPPSAVSQHGTQKVESQT
PTLSFTQSPSQTRVPPPNQANSASSTKIAASLLLLPLLAFI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG