YALI0E22550g

Overview

Description weakly similar to uniprot|P08640 Saccharomyces cerevisiae YIR019c STA1 extracellular alpha-1, 4-glucan glucosidase
Locus type CDS
Locus tag YALI0E22550g

Location

Species Yarrowia lipolytica Positions 2653007..2656591
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 3585 (nuc.)
Previous locus YALI0E22528r Next locus YALI0E22572g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E22550g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E22550gYALI0E22550g_mRNA-001YALI0E22550g_CDS-001

Nucleotide sequence

 

>YALI0E22550g
ATGCTCTTCTTCTCGACGTTATTGACCGTCTTGATGGCGACAATTGCCCTTGCCAAACAG
GTAGCCTCTCCTCTCAAGACCTTCGATCTTCACAGAGCTGGTGATCCGAACAACAAGGAA
GGTCATTACTGGGACCGGTGGGAACTGGACTTCACTTTTGCTCTCCAGCCCATGCAGGAC
AATGTTCAGCCCGGTGACTACTTTCAGTTTACTCTTGACAAACGTTTCTGGCTGGGTGAC
AAGCCCTATGACTTTGATGTTGTGGATCCCAACGGAAACCCCATCTACCATGTGAAGAAC
GACGGCTTCCTGTTCACCTGCACATACTCCGACTATGTTGCCGATAAGAACTGGGAGATC
AACGGTACCATGCGTCTGACTGCCACTGCCGAGCGAAACGAAATCAAGGAGGCCGGATGG
AACTCTTTCCACGTTGACACCGGCAATGGCACTGGTTTCGATGACTCCATCAACATTGTC
CCTGAGCTGGATGTCACCCAAGGCCGAAAGTGGGGAGCACGTTTTGGTGATGATGAGTAC
ATCTGGTATATTCAGCTTCCCAAGTCTCCTTACCATACTCTCAGGCTTGTCGATACTCTT
CGAGATGACTCTCTTGCCTTCCCTGACATGGACACTCTGTGGGACGGCATGAGAGTAAAC
CTTGGTTACAATATGGATGAGTTCTGGAACACCGACAAGTGGGTGGAGGTCCCTAAGGAA
GAGAGATCAAAGTACGTCACGCTCGACACAGTTGAGGGTGATACCTTCACTGCTACTCTC
CATGACATTCCCGATGATGTCAACGTCCAACTTGTTTTCACCACCAAGATTGTCAAGCCC
CAGACAGCGTACTGGAATCATTTCGGCTGGGAGATGTGGATGGATGCTAGTGGAGGTGAA
GGACCTGGAAATTCCATCAAGGGTGACACCTGGGGTGCTGGAAACCACAACCAAGACGGA
AGTGACTTCGATGGTGACGGAGAGGGCGATGGAAAAAGTACCACTCTGATCACCTCCACT
TTATTCACCAATACAACTACCCCGGGGTCCACCATTATCACCTTCTCCACTGAGCCCACC
TCTGCGGTTATCACGACTTCTGAAACTGCCCCCTTGACGGAGTCTGTGGTACCCTCCACC
GAGCCTGGCCTCACTACCGTCTCTACCGACTTCCCCAGCCCGGATAGCTCTATTGTGGAG
TCCACTACCCCTGTGTTGACAACTTCATCCCCCATCACCTCATCCCTCACCTCATCGTTC
AAATCCACTACCGAGCCAACCTCTGAGACTACTCCAGAGTCCACAAGCGTCCCGGAGACA
ACCATTGTGAACTCCACCAGCGTTTCCGATATTACTAGCGAGTCCACCAGTTCAATCCCT
GAGACTACCGTTGAATCCACAACTCCTAGCTCTACCACCCGTCGGTCCACCCAGGTCCAC
CCCACCGCTACTCTCGTGCCCTCAACTTCTGAGTCTCCGTCTTCTGAGGTATCTACCACC
CGTCAATCCACTCAGGTCCACCCCACCGCTACTCTCGTGCCATCGATCTCTGAATCTGCT
TCTATGATCTCTAGTGCTCCCGGCGTCAACTCCACCGTGCCTGTTACTGATTCTTCAGTG
CCCTCAGCTTCTGAGTCTCCTTCTTCTGAGGTATCTACCACCCGTCAATCCACTCAGGTC
CACCCCACCGCTACTCTCGTGCCATCGATCTCTGAATCTGCTTCTGTGATCTCTAGTGCT
CCCGGCGTCAACTCCACCGTGCCTGTTACTGATTCTTCAGTGCCCTCAGCTTCTGAGTCT
CCTTCTTCTGAGGTATCTACCACCCGTCAATCCACTCAGGTCCACCCCACCGCTACTCTC
GTGCCATCGATCTCTGAATCTGCTTCTGTGATCTCTAGTGCTCCCGGCGTCAACTCCACC
GTGCCTGTTACTGATTCTTCAGTGCCCTCAGCTTCTGAGTCTCCTTCTTCTGAGGTATCT
ACCACCCGTCAATCCACTCAGGTCCACCCCACCGCTACTCTCGTGCCCTCAACTTCTGAG
TCTCCGTCTTCTGAGGTATCTACCACCCGTCAATCCACTCAGGTCCACCCCACCGCTACT
CTCGTGCCATCGATCTCTGAATCTGCTTCTATGATCTCTAGTGCTCCCGGCGTCAACTCC
ACCGTGCCTGTTACTGATTCTTCAGTGCCCTCAGCTTCTGAGTCTTCTTCTTCTGAGGTA
TCTACCACACCAAGCGTCAACTCCACTGTCCCTGTTACTGAGTCTCCCGTGCACTCCACC
AAGCCCATTTCTGAGTCTCTTATTCCCTCCTCGAACCATTGTGTCTCCACCGTCACTCTG
AATACAACAAACCCTGGTGGTGAGCCCGAGACCACTGTCGCTACCGTTACAACCCAGGAC
TGCAACCCCAAGCCTTTCTCTTCTGTTAGTGTGACAGGTTGTGTTGAAACTTCCATCCTG
ACTACCACCAACCCGGCCGGAAAGCCTGAGACAGTTACCACCACAGTTACAAGGGACCAC
TGCGAATCTCCCGCTCCTTCTTCAGAGTGTGTATCAACCGTTACCCTTAGCACAACTAAC
AGTGAGGGAACTCCAGTGACAACTACCGAGGTTACCACCCTCGACTTTTGTCCTTCCGTG
GCCCTTGAGACCACTATGACAGTGCCTACTAAGGTTACCACCACCGTCACCCAGACTGTT
TCTGTCTGCGACGACAGTAAGTGCTCCGAGACTCCCATTACTATCACCACCGTCGTTCCT
TCCAACCCTAAAACCACTGTCATTACCACAGAGATTGACCACAAGACTGTGACTATCACT
GTTCCTTGCGACCCCGAGATTCCTGCTTCCAATACTGAGTCCGCGACTGAGCCTGCATCC
AAGCCTGTTTCTGAGACACTCTCCAAGCCTGAGCACTCTTCCAACGAGCCCCAGACTGAG
GTTCCTCAGACTGGATCTCCTGCTGTGTCTCCTTCTCCTGCACCCACCAAGCCTGCCGAG
ACCGAGTCTTCAACCCCCGAGCAGCCCTTGTGGCCTTCCGAACTTGTCACCAAGACCTCT
GGAACGGTGGTTATTGTTATTCCTGGGCAAGTCTCTTCGAAGTCTTCTCCTGCAGAGTCC
ATCACGTCTACCGTCATTCAGACTGTTTCCTACTGTGACGACTCCCGCTGTTCTAAGACT
CCCGTCACTTTAACCACTGTGGTTCCTACCAACCCTGCCTCCACTACCATTCAGACTGTC
ATTGACAACAAGTCTCTCACCGTGGTTGTTCCTTGTGAGGAGACACCCACTTCTAACAAG
CCCACAGTATCTGAGGTCCCTAGCAAGCCTAGTCCATTTCCCGAGGCTCCTGGTAAGCCC
ATCCCTGAGGCTCCTGAAACCACAGGGACCCCCTCCACGCAGCTAGAGACACCCGCTTCA
ACTCTGGTTCCCGTTCCTCAGCCTGAGGGCTCCAAGCCAGCTCAATCCCAACCTCAGCAG
CCGCAGAAGCCCGAGGCTACCACTCCCGTCCAGGCATCTTCCGGCTCTACCAACAAGCTT
GCCTTGTCTGCTATAGTTCTTCCTCTTCTGACCCTGTTCTTTTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E22550g_CDS-001

Protein length: 1195 aa.
Product: Conserved hypothetical protein

>YALI0E22550g_CDS-001 MLFFSTLLTVLMATIALAKQVASPLKTFDLHRAGDPNNKEGHYWDRWELDFTFALQPMQD
NVQPGDYFQFTLDKRFWLGDKPYDFDVVDPNGNPIYHVKNDGFLFTCTYSDYVADKNWEI
NGTMRLTATAERNEIKEAGWNSFHVDTGNGTGFDDSINIVPELDVTQGRKWGARFGDDEY
IWYIQLPKSPYHTLRLVDTLRDDSLAFPDMDTLWDGMRVNLGYNMDEFWNTDKWVEVPKE
ERSKYVTLDTVEGDTFTATLHDIPDDVNVQLVFTTKIVKPQTAYWNHFGWEMWMDASGGE
GPGNSIKGDTWGAGNHNQDGSDFDGDGEGDGKSTTLITSTLFTNTTTPGSTIITFSTEPT
SAVITTSETAPLTESVVPSTEPGLTTVSTDFPSPDSSIVESTTPVLTTSSPITSSLTSSF
KSTTEPTSETTPESTSVPETTIVNSTSVSDITSESTSSIPETTVESTTPSSTTRRSTQVH
PTATLVPSTSESPSSEVSTTRQSTQVHPTATLVPSISESASMISSAPGVNSTVPVTDSSV
PSASESPSSEVSTTRQSTQVHPTATLVPSISESASVISSAPGVNSTVPVTDSSVPSASES
PSSEVSTTRQSTQVHPTATLVPSISESASVISSAPGVNSTVPVTDSSVPSASESPSSEVS
TTRQSTQVHPTATLVPSTSESPSSEVSTTRQSTQVHPTATLVPSISESASMISSAPGVNS
TVPVTDSSVPSASESSSSEVSTTPSVNSTVPVTESPVHSTKPISESLIPSSNHCVSTVTL
NTTNPGGEPETTVATVTTQDCNPKPFSSVSVTGCVETSILTTTNPAGKPETVTTTVTRDH
CESPAPSSECVSTVTLSTTNSEGTPVTTTEVTTLDFCPSVALETTMTVPTKVTTTVTQTV
SVCDDSKCSETPITITTVVPSNPKTTVITTEIDHKTVTITVPCDPEIPASNTESATEPAS
KPVSETLSKPEHSSNEPQTEVPQTGSPAVSPSPAPTKPAETESSTPEQPLWPSELVTKTS
GTVVIVIPGQVSSKSSPAESITSTVIQTVSYCDDSRCSKTPVTLTTVVPTNPASTTIQTV
IDNKSLTVVVPCEETPTSNKPTVSEVPSKPSPFPEAPGKPIPEAPETTGTPSTQLETPAS
TLVPVPQPEGSKPAQSQPQQPQKPEATTPVQASSGSTNKLALSAIVLPLLTLFF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG