YALI0E22440g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0E22440g

Location

Species Yarrowia lipolytica Positions 2643642..2644427
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 786 (nuc.)
Previous locus YALI0E22418g Next locus YALI0E22462g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E22440g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E22440gYALI0E22440g_mRNA-001YALI0E22440g_CDS-001

Nucleotide sequence

 

>YALI0E22440g
ATGAGATTCTCCCGCTTCACTTTCGTCCTCGTTGCCCTCACTGCCTCTGCCTCGCTCACA
GACGACATCTATGCCGTTCTGGACTACGCCGGCGATCTGCTGGGTCCTGGAAAAGCCAGA
TTTTCGGCAGCCATCTCTCAGATCATGCAGAACCCGCTGGTAATCCGGGTTATTGACGAT
CTGAACAACTCGAACCACACCACTGAGGCGAATGAAGAGCTTTTGGATCATGTCCAAGAG
GCCATGACAGGTCTGTTTGGTACAGCAAATACTACGGAGCTGGTTTCCGAATTCTCCAAA
CGCTCTTCCACCAAGTTTGACAATGCTGAAGTGAACGAGATCATCATGAAAGCGAACCAA
CTTGTCGGAGACCATCTCGAGTGGGTCGTGCCTAGTCTGGTGGAAGATCAACGACTTCAG
AATAGAACAGTCCCATTCCAGCAGGCTGTGGAGGTCCTCAAGGAGCAGAACCAGGAGCAT
CCCATGATGCAGAATGGAGACCAGGGGGGGTTTTTGGGCCTGGTGTCCCGACTCTCTCCT
GAAGCCCTGTCTCAAGTGTCACTCAAACCAGCCCCATCTCGAACCCATCCGGCCAAGATG
TCAGCGACACCAATCTCCAAGCTATCTATGGCTGCCCTTCCAACAACTCCAGGTGCTGGG
GGAAACTACGACTCCACACCCCAAGCAACCATCACCTCGCAACCCCAAGCCAATGGTATC
AAGACCATGAGATCTCACCTTCTGTCTGTCGTCCTTGCTTTCGTAATTGCCGTCTCCCTT
CAATAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E22440g_CDS-001

Protein length: 262 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0E22440g_CDS-001 MRFSRFTFVLVALTASASLTDDIYAVLDYAGDLLGPGKARFSAAISQIMQNPLVIRVIDD
LNNSNHTTEANEELLDHVQEAMTGLFGTANTTELVSEFSKRSSTKFDNAEVNEIIMKANQ
LVGDHLEWVVPSLVEDQRLQNRTVPFQQAVEVLKEQNQEHPMMQNGDQGGFLGLVSRLSP
EALSQVSLKPAPSRTHPAKMSATPISKLSMAALPTTPGAGGNYDSTPQATITSQPQANGI
KTMRSHLLSVVLAFVIAVSLQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG