YALI0E22462g

Overview

Description similar to uniprot|Q08108 Saccharomyces cerevisiae YOL011W (ohnolog of YMR008C) PLB3 phospholipase B (lysophospholipase)
Locus type CDS
Locus tag YALI0E22462g

Location

Species Yarrowia lipolytica Positions 2644893..2646545
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1653 (nuc.)
Previous locus YALI0E22440g Next locus YALI0E22484g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E22462g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E22462gYALI0E22462g_mRNA-001YALI0E22462g_CDS-001

Nucleotide sequence

 

>YALI0E22462g
ATGCAATTACGGTTGATTTTGACGGCATTTGCCTCTTTGGCAATTGCAGACTACACTCCT
GTGCGAGTTCCATGTCCCTCCACCAATCTTACGCGTCCTGCCATTGGACTGAATCCTGAC
GAATCTGCTTACATTGAGCAGCGACATACCAAGACCAGAGAAAGCCTCAAGACATTTCTG
AAGACTCTAGAAAGTTCCTCTTTTGATGTTGATGCCTTTCTGAATGAGAGGTCTCCCAAG
ATCGCCGTTGCAATTGCTGGAGGAGGAGTAAGAGCTTCTCTGTTTGGAGCCGGAGTTTTG
GCTGGTCTGGATGGTCGAGTTTCCCAAAACGGTACCGGGGGTCTGCTTCAGGCAACAGAC
TACATTTCTGGTCTTTCTGGGGGCTCCTGGCTTGTTGGACTGCTCTGTTTGTCTGACTGG
ATAGCCGCTGACCAGCTAGTTGGAATGAGCGAGAAAATGAAGTTCCCAGGCATGCTTGAC
ACTTTTGGCATGATGCTCAAGATTCTCACAGACACCATGGCTAAGAAAAAGGCCGGCTAC
CAGACATCCGTGGTTGATCAGTGGGGCAGACTGTTCCATTTTGTGACTGCCGAAGCTGGT
TTGAACTACACGGATCCGACATGGAGTGGAATTCGCAACCTGAGCTCGTTCCTGGACTTC
TCCATGCCCTTTCCTATAATCACCTCAACTTCTTTATTTCCAGGAACCTCGTTTGACGTC
ACCCATATCGACTATATCAACCCCATGGTTGAAATGACACCCTTCGAGTTCGGAAGCTGG
GACAGAAACTTCCGTTACTTCGCTGACACTGTGTTTCTGGGCACGGAGATGGAAGACGCG
AAGCCCCTGAATCAGTGTGTGCGTAATTACGACAATCACGGTCTATTCCTGGGTTCTTCA
GGTGGAATCTTCAATGCTGACGTGATCGGCGGATTTGAAATGAAAGGCTTACATGCGATA
TTTTTGTCTGGAGTCTTGGAGTATCTTGATCTTGTCAACGAAGGTGAGTTCCGAGTAGGA
CTTATTCAGAACCCCTTCTACAAGATGGCACATCTAGTCTCCAACCAGACAATCTCCAGG
TTCATGTACTTGTGCGATGGAGGGTTTGAGAAGCAACAAAACATTCCTTTGCTTCCTTTT
CTTCAGCCTGAACGAGAAATAGATCTTCTCTTTGCCACTGATCCATCAACAGATACTATG
GATGGTCATGGATGGCCCAATGGAGCTTCTCTGAGACACACAAAGGAGAAGAGTGACCTG
GAGTTTGGCAAAGGAATTTACCCTGAAATTCCCGAGGAGGACGAGTACTTGAGCAGAAAC
TTGTCCATGCAACCTGCCTTCTTTGGCTGCGATATCGCTTCTCTGAAACAGTACAACAAT
ACGCAACGGTATGCCCCTGTGATTGTCAACATTCCCATGGGAAACCTGACGTATGCTTCG
AATTTCTCGACTGGTAAGTTCTTTTACACTCATGAAGAAACCCAGGGAACCTATTTGAAT
GCCTACAATATGGCCACTAGGTCCAACTTGACCGAGGACGAGAATTGGAACGTGTGTCTA
GGGTGCGTATCACTGTTGCGCGAATTTCAGAGACGGTCCAGTGAAATCCCCGACCAATGT
CAGACCTGCTTCAACCGCTACTGTTTTAACTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E22462g_CDS-001

Protein length: 551 aa.
Product: Phospholipase B (lysophospholipase) involved in lipid metabolism, putative

>YALI0E22462g_CDS-001 MQLRLILTAFASLAIADYTPVRVPCPSTNLTRPAIGLNPDESAYIEQRHTKTRESLKTFL
KTLESSSFDVDAFLNERSPKIAVAIAGGGVRASLFGAGVLAGLDGRVSQNGTGGLLQATD
YISGLSGGSWLVGLLCLSDWIAADQLVGMSEKMKFPGMLDTFGMMLKILTDTMAKKKAGY
QTSVVDQWGRLFHFVTAEAGLNYTDPTWSGIRNLSSFLDFSMPFPIITSTSLFPGTSFDV
THIDYINPMVEMTPFEFGSWDRNFRYFADTVFLGTEMEDAKPLNQCVRNYDNHGLFLGSS
GGIFNADVIGGFEMKGLHAIFLSGVLEYLDLVNEGEFRVGLIQNPFYKMAHLVSNQTISR
FMYLCDGGFEKQQNIPLLPFLQPEREIDLLFATDPSTDTMDGHGWPNGASLRHTKEKSDL
EFGKGIYPEIPEEDEYLSRNLSMQPAFFGCDIASLKQYNNTQRYAPVIVNIPMGNLTYAS
NFSTGKFFYTHEETQGTYLNAYNMATRSNLTEDENWNVCLGCVSLLREFQRRSSEIPDQC
QTCFNRYCFN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG