YALI0E22418g

Overview

Description weakly similar to uniprot|F9XIQ0 Zymoseptoria tritici hypothetical protein MYCGRDRAFT_110574
Locus type CDS
Locus tag YALI0E22418g

Location

Species Yarrowia lipolytica Positions 2640508..2642409
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1902 (nuc.)
Previous locus YALI0E22396g Next locus YALI0E22440g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E22418g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E22418gYALI0E22418g_mRNA-001YALI0E22418g_CDS-001

Nucleotide sequence

 

>YALI0E22418g
ATGATGGATGGACCCGGAGTACAGCGAACGTCGTCGCGTTACAGATCCAAGTCGAGATCG
AGAAGCGCGTCGGGCAACACAAACACAAACACAAGCACCCAAAACCACAATCCCTTCACC
CAAAGCCCTCTGGCTTCCCCCACAATTCCAGACTTTGACTGGGGCCAGACGATCCAACAG
CAGCATCTGCAGCAGCTTCAGCAAGCTCAGTCGCAGGCGCCGTTGCAACCTCCTTTTGAC
GGCGGCTTCCCAGGCAACAGTGCCCATTCCAGTCCTCAGAATGGCTTCTTGAACAGTGTG
CCTAATGGGTTTCCAAACAGCCCTCAGAATGGCTTCTTGAATAGCCCCCAAAACGGCTTC
TTGAATAGCCCCTACGGGTCTCCTATGGTTAATGGTGTGCCTACGAATGGGAATGGAAAA
GGTCACCCCAATGGCACTTCTTCTCCATCTAGAAACCCGTTCCTGTCCTCTCCGTCTGCC
GCCCCCCAGGTCGATCTTGGCCGAACCCGATCCAGATATAGGAAGCAGGCAAGTCCGAAT
GTGAACATGGTCGGCGCCCTACCTCCAATTCCTGCTCTTCAGAAGAAACCCAGTATTCAG
GGTCTGCAACATAAACCCAGCTTACCGGGTCTGCAGCACAAGTCCAGTCGTTCTCGACTC
AAGGTGAACACTGACTGGTCCGATTCAGACTCAGATACTCCCAAGAGTGCCGGATCCGGA
TCACGTGTGATTGCCCCCAGTACTGCCATGGCCACGCGAGACTCGCTCAAGGTCCAGGTC
GAATACATGTCTGAAGAGCCTCGCCTGATGACTATCAAGAACACAGCTACGGTGGACTAC
CTGCTACAGCTCTGCCAGGTAAAGTGGAGTACGGAGTCGCTGGGTGGCAGCCTTGTTTAT
GAGGTCTGGGGTGAGGGCATGATTCGAGAAATGCGTCCTGAGGAGGAGTTGAAGAAAACG
GTCGACTCTTGGCCTCGAAATGCACAAAACTGCATCAAGGTAGTCGATAAGAGCCTCACT
CCCCGTCTTCCAGCGAGCCAGGGACCTGTGGAGACCGAAGTCATGTCCAAGGTTCAGTAT
TATCGAGATCTGAGCTCCTGGAAGTCCGTCTACTTGTACATGTCTGCCAACCTGGGTCTG
ATTCTGTCCAAGAAAGAGTCTGATGCCAAATTGGGATACATGGAGAGCGCCAAGAACTAC
AATAAAGAGGGCCAGACTAGCAGCAGCGTTCCCAACCTGAAATTCAAGCACAAAGACGCC
CGAATCATCGGCCTCAGCAACTTCAAGATCTACCATTACACTGAGAACAAGAAGAAGTCT
GTCAAGCCTCCAAAACAGTTCACTCTGGTTCTCAAGAGTCTGCAGAACCTCGAGTTCTTT
GAAAACCGACTCGATTCCATCTTTGTCATTTCTACTAACGACGTCAGCCTCGTGCATTCC
ATTATCAGAATTGTCAATATCGCCTCCAGACCTGTCAACCCAATCATGCCCAGAGAAGAC
GAGCCTTTGTCGCATCTGCAAAACCGTCTGGCTCCACGAATGGCTGCACCAAACACAATG
TTCAACAAGAATTCGCTGTTGGACAATGCACGGCTGAAGAGCACACGTTCGAACACCCGG
TCGCCGACCATGTCACCAAATCTCTCCCCCAACATTTCGCCTCAACAGAGCCCATGGGAT
GAACGCACATTTAACAGCGGTGGCTTGTTGTCTGAACAGAAGTTCCCTCGCGAGAAGATC
TTCAAGCAAACCAACCATATTAACCCTCTGGCCAAGGACAAGGATATCATCAAGCAGGAC
AGTCTGTTGGGTCGGGCCATGACCATGAAGAGAGTCTAACTCGTGGTTTATATTCCGTAT
TGTATTTTTACCATGTATTTTTACCATGTATTTCTACCATGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E22418g_CDS-001

Protein length: 613 aa.
Product: Conserved hypothetical protein

>YALI0E22418g_CDS-001 MMDGPGVQRTSSRYRSKSRSRSASGNTNTNTSTQNHNPFTQSPLASPTIPDFDWGQTIQQ
QHLQQLQQAQSQAPLQPPFDGGFPGNSAHSSPQNGFLNSVPNGFPNSPQNGFLNSPQNGF
LNSPYGSPMVNGVPTNGNGKGHPNGTSSPSRNPFLSSPSAAPQVDLGRTRSRYRKQASPN
VNMVGALPPIPALQKKPSIQGLQHKPSLPGLQHKSSRSRLKVNTDWSDSDSDTPKSAGSG
SRVIAPSTAMATRDSLKVQVEYMSEEPRLMTIKNTATVDYLLQLCQVKWSTESLGGSLVY
EVWGEGMIREMRPEEELKKTVDSWPRNAQNCIKVVDKSLTPRLPASQGPVETEVMSKVQY
YRDLSSWKSVYLYMSANLGLILSKKESDAKLGYMESAKNYNKEGQTSSSVPNLKFKHKDA
RIIGLSNFKIYHYTENKKKSVKPPKQFTLVLKSLQNLEFFENRLDSIFVISTNDVSLVHS
IIRIVNIASRPVNPIMPREDEPLSHLQNRLAPRMAAPNTMFNKNSLLDNARLKSTRSNTR
SPTMSPNLSPNISPQQSPWDERTFNSGGLLSEQKFPREKIFKQTNHINPLAKDKDIIKQD
SLLGRAMTMKRV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG