YALI0E22000g

Overview

Description similar to uniprot|P23796 Saccharomyces cerevisiae YMR283c RIT1 initiator tRNA phosphoribosyl-transferase
Locus type CDS
Locus tag YALI0E22000g

Location

Species Yarrowia lipolytica Positions 2593368..2594687
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1320 (nuc.)
Previous locus YALI0E21978g Next locus YALI0E22022g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E22000g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E22000gYALI0E22000g_mRNA-001YALI0E22000g_CDS-001

Nucleotide sequence

 

>YALI0E22000g
ATGACTACCATATTGAATGCCGATACAGACGCTCTGTCGTTCGGAAAGCTGGCAAAAGAT
CTCCGGAAAGACAGCCGATCTGTGAAAAATCGGGTCCAGTCGATTTTCCACGACTCGAAG
CATGTCAAACGAGTGTCTGAGTCGTTCAGCCTTCCTCTGGTGGCCAATGAACGGTGTGGA
AGATGGTACATTGCCCCTGATGACATTGCGGAGAGTGTCTACTTCAAGTCGACCGACGGA
CATACCAATGTGCATAGCTTCTCTACTCGACGACTCAATCTGCATCTTCTGGACTTTGTC
AGAACCCATGGAGGAGCTGTAATTGTGGATTCGACTCGAAGAGGCAAGCCCATTCCCGAT
GCTCTATCCAAGACTATTCCCCAATGGTGCAGAGTGATCAATCTGGCTGTGTTTGGCTCT
GATGCCCCTCCTCTGACCACCAGTCCGATCATAGTGGGCAAATCTGAACATTATGAGATT
GAAAAGAAGGTAGATGGCTGGGTGGATCAGTTTCGTAAGACCGGAGTTGACATTGAGAAG
CTGAAACAGACTCTGGATAAGCCTGTGAAACCAATCTGGGTCACTCCAAAGGATATGTTA
CATTCTGAGCCACCCGTCTACACAGATTTCTACCCTCTGGTGCTATGTACGGCCTCGGAG
ATGGTCCAGGATGGAACAGATAGAAGGAACGGATACATTTACGTCCAAGGAGCAGCTGAT
GATCACGAGGAATGGGCTGAAAAGCTCACGCCAACACTATTATGGACTCATAAAGAGGTT
CTAGGAGACATGAGCAAGACTGATACCGAACTTCTGGAATATGTCAACTCACTGGAGGAT
TTCAAAGACAAGGGGGATACTGCGGTGACTATCGAACCAACAGGATTATCTTTTGGAGCG
TCTGAAACACCGGAGTCGTATAATGCAGTCATCTCAGTTGCCAAAACAGTTCCAAAACAC
AACAAGGTGCTTCACAAGCCATTGGGCGAAGGAAAGAAGGGCGCTAAGGAGCTGCGAACA
GCGCTAGAACCCATCTCCAAATTTTACAAGGACTTCGTGGGTCAAAAAGTGTTTGTAATG
GCAGACTCAGATGACCTATCTGTCTGTATCATCCTCACATTGTTCTGTCTGTACTTCAAC
GAGGACGGGTCTATCAAGGAGGGAAAGGGAAACATGTCCAAGGAGGTGATAAGGAGACGA
TTGGTGTACATGATTCAACAGTGCAAGACCATCAATCCATCTCGAGCTACTCTGAACGCT
GTCAATTCGTTTCTGATGGGTTAACCTATATGTATATGTATATAATAAATAATTGGATTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E22000g_CDS-001

Protein length: 428 aa.
Product: 2'-O-ribosyl phosphate transferase, putative

>YALI0E22000g_CDS-001 MTTILNADTDALSFGKLAKDLRKDSRSVKNRVQSIFHDSKHVKRVSESFSLPLVANERCG
RWYIAPDDIAESVYFKSTDGHTNVHSFSTRRLNLHLLDFVRTHGGAVIVDSTRRGKPIPD
ALSKTIPQWCRVINLAVFGSDAPPLTTSPIIVGKSEHYEIEKKVDGWVDQFRKTGVDIEK
LKQTLDKPVKPIWVTPKDMLHSEPPVYTDFYPLVLCTASEMVQDGTDRRNGYIYVQGAAD
DHEEWAEKLTPTLLWTHKEVLGDMSKTDTELLEYVNSLEDFKDKGDTAVTIEPTGLSFGA
SETPESYNAVISVAKTVPKHNKVLHKPLGEGKKGAKELRTALEPISKFYKDFVGQKVFVM
ADSDDLSVCIILTLFCLYFNEDGSIKEGKGNMSKEVIRRRLVYMIQQCKTINPSRATLNA
VNSFLMG*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG