YALI0E22022g

Overview

Description similar to uniprot|P38351 Saccharomyces cerevisiae YBR279w PAF1 DNA-directed RNA polymerase II regulator
Locus type CDS
Locus tag YALI0E22022g

Location

Species Yarrowia lipolytica Positions 2595151..2596366
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1216 (nuc.)
Previous locus YALI0E22000g Next locus YALI0E22044g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E22022g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E22022gYALI0E22022g_mRNA-001YALI0E22022g_CDS-001

Nucleotide sequence

 

>YALI0E22022g
ATGTCCCGAAGACAAGACTATCTGGTGCGAGTGCGGTATCAGAATGAGCTGCCTCCTCCG
GAGCTGCCTCCCAAAATGCTCAACATACCCGTGCCTCCGGAAAAGCTGACATCTCTGGGA
ATTAACATTCTGTCCGACATGCAACGACGAGAAAGTCCGCAAATCAATGTGGACAACGAT
CTGGGAATGCCCCTGGATCTGACGGAGATTCGAGGTGTGTTTGAGCAGGACGACGAATCC
GGTCTGCTGCCTCTGGAGAATCTTCCCGAGCTGGATCCTCGAGATTTGGTTCTTCTGAAG
GAGCCCCAATCCACCGGCAACAAGTCACAGCCCGGCGTGGCATTCCTGCGACGAACCGAG
TACATCTCTAGCGAGGTTTCCGGCGGCCGAAAACTCGAGACGCTCAGTGCTTCGCAGCGT
CGACTGGCACAAAAGACTCTGGAGGAGAGCTTCCAGGACCCCGAGTCACAGCTACGAGCG
GTCGAGGCGACTTTCGAGGCTGCCAACACGGACATCAAGACGCTCAAGCACCCCAAAAAA
CCCCATCTCACGGCCGTGGAGTCGTTCCCCATTCTGCCCAACTCGCAGATTTTCGATCTC
ACTTTCCTGACCATGAAGATGGTGGGATCTGCCGTCGGAGTGCCCCCACTGCCCGATGGA
TCGCCCGACCCCAAGATGTCTGTGTCGCTGTTCCGACCAATGACGCTGGAGACGGACGAG
TGGATGAGCATGTTCCTGACCAAGGACGAGGAGTCCAAGGACCTCAAGCGACAACTGGAC
TCGACCGACGAGCACGTGGCCGACGACAAACACGTGTACCGGTTCGAACACAAGCGAGAC
TATGATATGGATCTTCAGATGAATGCCAGCCAGTTCGAGGAGATTGTCATCGACGTCGAT
CTGGACAAGCCTGGATCGGTTGCCCACTACGTGCCTGTGCAGGGTAAGACCAACCTCAAG
CGACGACGAGTGCTCAAGTCGCTGCGGTCACAGATTAAGGAACACAACATTGCCGCCATT
GATCTGACTCTGCGAGATATCACGGCTGAGGAGAGCATTCTCAGAGACAATACTCGAGCC
GAGTACGACCCGGTCAGTTATACGGTGATGGATCTTCCCGAGAGTGAAGAGGAAGATGAG
GAGGACGAGGATGAAGAGTAATCTGGTAGATAGATTTAATATGTATTTGTATGATATGAG
GATGAAGGGTATAGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E22022g_CDS-001

Protein length: 387 aa.
Product: Component of the Paf1p complex involved in transcription elongation, putative

>YALI0E22022g_CDS-001 MSRRQDYLVRVRYQNELPPPELPPKMLNIPVPPEKLTSLGINILSDMQRRESPQINVDND
LGMPLDLTEIRGVFEQDDESGLLPLENLPELDPRDLVLLKEPQSTGNKSQPGVAFLRRTE
YISSEVSGGRKLETLSASQRRLAQKTLEESFQDPESQLRAVEATFEAANTDIKTLKHPKK
PHLTAVESFPILPNSQIFDLTFLTMKMVGSAVGVPPLPDGSPDPKMSVSLFRPMTLETDE
WMSMFLTKDEESKDLKRQLDSTDEHVADDKHVYRFEHKRDYDMDLQMNASQFEEIVIDVD
LDKPGSVAHYVPVQGKTNLKRRRVLKSLRSQIKEHNIAAIDLTLRDITAEESILRDNTRA
EYDPVSYTVMDLPESEEEDEEDEDEE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG