YALI0E21978g

Overview

Description weakly similar to uniprot|P47027 Saccharomyces cerevisiae YJL090c DPB11 involved in DNA replication and S- phase checkpoint
Locus type CDS
Locus tag YALI0E21978g

Location

Species Yarrowia lipolytica Positions 2591657..2593421
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1765 (nuc.)
Previous locus YALI0E21956g Next locus YALI0E22000g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E21978g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E21978gYALI0E21978g_mRNA-001YALI0E21978g_CDS-001

Nucleotide sequence

 

>YALI0E21978g
ATGCTAGCAGGATACGTCTTCTGTTGCACTGGCGTAGACGGCGACCTCAAGTCGTCCATT
GTGGCCAAGTGTCGCGCCATGAAGGGTGAGATCCAGGACAATCTGACACCTGACGCCCAC
TTTCTGCTGGTCGGAAACCAGGACAGTGAAAAGTATCTGTTTGCTTCACACCAGCGACTG
GATATGACTTTCCTACATCCCCAGTTCATCGAAAAGCTCCATGCGCGTTGGATCGCGGCC
GAGACCATCGATCTGGATAACGTGATACGCGAATTCCGCATGCCTGTATTCTTCAACAAA
AACCTGAGCGTGTCTAACATTGAGGAGCGACAACCGATGATTGACACGATAGAGGAGAAT
GGAGGCATATTTGACGGAAACGTCAAGACACTCGTGACCAACATTTTGGTGACTCCCAAA
GCACAGGGCAAAAAATACGACTTTGCCATGAGAAAAAGCATTCCTGTCGTTCATCCTATT
TGGATCGAACATTGCATCAAGAGAGGAGCCATGTTGGATACCAGCGACTTCCACCCTGCC
AAGGAAGGAGTCGAGAACTCAGACACAGCGTGGTTTAAAGATATGCATCCGGAACCGTGG
AGGGAGGTGGCTCGAGTGTCGGAGGAGGTTGCGCGGCAACAGTTTCGAAGACCAAAGGTG
CTCAAGGCTGGTCTGTGGGATAGTCATAACAGTATCACCGAGTCGCGTGCAGGGATAGAA
GCACCGTTTTTCGACGAGGAGGAGCAAGACACGTCGTCATCACGTGAGAATGGCAGATCG
CGTCACTCAACAGGCATCTTTGCTGGTCATTCGATTTTGTTTGTTGGGTTCATCAAGAAG
CAGCTTGAGAAGCTTCAACAGACAGTGGTTTCACATGGAGCTACGCTGGCTTCTTCGGAA
ACCACGGCAACCAATATTATTGTGCATCCTGAGATTCCTTCAGATCGATACGATCTTCTG
GCAGCTTCATGTACCACGCCCATCTCGACATTCTGGCTGGTGGAGCGTTCCATATTCTAC
AAAAAGTGGACTAGTGATATATGGTCTTCCTATGTGCCTGAAAAGGATCTGGTTGCGTTC
TCCAACGTCAATATTTCCATTTCCGGCTTTGATGGAGTAGAGCTGATGCATATTGAAAAG
CTCATTTCCATGTTAGGAGCCCGATACAAGCCCGTTTTCGGCGAGAAAACAGGCAGTGTG
CTTGTGGCTGCGTCGCCTCATGCTCGCAAGGTGCGGAATGCACAGAAATGGATGATCCCA
GTGGTCTCTATCGACTGGTTGTGGGACTCTGCTGTGGCGTCCAAAATCATGGAGGTTGAT
CGGTACATTGTTGGAGGAAGCCGAGTGTTCCATGAGATGCGTCACTTCGACAGTCGAGGA
AACATGGTGGATATGATGGGAGACAAAAACGCCACCCAAAGAGGACTGTCTAGAAAACGC
CGTATGGTTGACAGCCCTGTCAAACACAGGACATCCACTGGACCCTCTGAGTCGCCTCTC
AAGAAGCTGTCTTCTTTCGGAAGTCCTAGCCCTAAAAAAATGCAGCAGCAAGTCCAAAAG
GGCAGTCCTAAAAAGACCCACAAGGGTCTGAAGGTGACGGTAGAGAAGCTTACAAGACAG
TGCTCAAAGGCTGCTGTGTTGGAAGAGCTTTTGGGATACACTACAGACGTCAGTGAGCTG
GAGAGCAGTCAGAAGATCATGTGCGACGATTAAATCCAATTATTTATTATATACATATAC
ATATAGGTTAACCCATCAGAAACGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E21978g_CDS-001

Protein length: 571 aa.
Product: Conserved hypothetical protein

>YALI0E21978g_CDS-001 MLAGYVFCCTGVDGDLKSSIVAKCRAMKGEIQDNLTPDAHFLLVGNQDSEKYLFASHQRL
DMTFLHPQFIEKLHARWIAAETIDLDNVIREFRMPVFFNKNLSVSNIEERQPMIDTIEEN
GGIFDGNVKTLVTNILVTPKAQGKKYDFAMRKSIPVVHPIWIEHCIKRGAMLDTSDFHPA
KEGVENSDTAWFKDMHPEPWREVARVSEEVARQQFRRPKVLKAGLWDSHNSITESRAGIE
APFFDEEEQDTSSSRENGRSRHSTGIFAGHSILFVGFIKKQLEKLQQTVVSHGATLASSE
TTATNIIVHPEIPSDRYDLLAASCTTPISTFWLVERSIFYKKWTSDIWSSYVPEKDLVAF
SNVNISISGFDGVELMHIEKLISMLGARYKPVFGEKTGSVLVAASPHARKVRNAQKWMIP
VVSIDWLWDSAVASKIMEVDRYIVGGSRVFHEMRHFDSRGNMVDMMGDKNATQRGLSRKR
RMVDSPVKHRTSTGPSESPLKKLSSFGSPSPKKMQQQVQKGSPKKTHKGLKVTVEKLTRQ
CSKAAVLEELLGYTTDVSELESSQKIMCDD*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG