YALI0E21956g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0E21956g

Location

Species Yarrowia lipolytica Positions 2589207..2590751
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1545 (nuc.)
Previous locus YALI0E21934g Next locus YALI0E21978g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E21956g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E21956gYALI0E21956g_mRNA-001YALI0E21956g_CDS-001

Nucleotide sequence

 

>YALI0E21956g
ATGCTACGGAGCTGCGGACGAGCTGGAAAACCACTACGACGGCTCGCCGCCGTCCAGACA
AGAGGCTACCGAGATCCCTACCACGTGTCCTGGCACTTCAACTTCAAGCCCGAGGCCGTG
GAGCCTCCGACGGGTCACCGGCTAACCGACAATCTCAGCATTGCGCTCAACAAGCGGAAC
AAGAAGGAGAATGGCACCGGAGCTCTCAAACTTGCGCTGGAGATCTGCGAGACCAGCGGA
CCCGAGGCCATCACACCCATTCTGTACGGCCAATTGCTGGAGAATGTGTACGAGGAGGTG
AGAGGTATTCCCATTTCCAAGCTACGAACATACAACACTGCCCGTCTGCAGGTGCTGGAG
AGTCTGTCGCACTTTGTGCCTGGCCTCAACGCCCGTCATTACACATATCTCATCAAGCTG
GCTCACCTGACGCGACGCCCAAAGCAGGTACAGGACGCATGGGAGCAGGCCATGCTCAAC
GAGTGCGACAAGACATCTGCTCTGTACAACGCGTACCTCAAGGCTCGAACCGATGCCTCC
CCCCGGCTCCGAGGTAACAGTGACATGCCCGATCTGGCAGGTGCCAAGTTCTGGGCGACC
AACAAGGACGTGTCCGATTCTAGAGCTCATGCGCTTGATCCCATCGAATTCATGAACGAG
ATGCGAGACCGGGGTATCGAGCCCACTCGAATCACATACGCCATTGCTCTCAACCACTAT
GGTCAGCAGAACAACTTACCTATGGCGGTGAGCATCTGTGAGAACCTGTGGGGAGTGGGA
TTCAACAGTGGAAAGTTGGAGGGACCTCGAGTACCCCACACTTCGATAATGCACCCGACT
CCATTCACTCTCATCTCTATCATTGACGCATTCGGTCTGAATGACCGTCTAGTCGAAGGA
AAGGCATATTGTGAAACTATTGCTGATATCTACGGCATTCGACTTGACAGTCAGTTGGCT
CAGGGATACTGGACCCATCTAATGAGACATGCTCTGTACACTGGTATCCCTCACGGACAA
AGCTCAAAGGAAATGTGCAACTCTGTGTGGTCCAATATTGTTGAGTTCGACTACCCTCCT
TCTCCCGCGCAGTATTCTCTTCGAATCAGAGACTTGCTCGCCAGAGACCGTCTTGAAGAC
CTCCAAACTCTGATGCACTACGCTCTGAGCGTGGATAAGGTTGGAGAAATGGCGGCCGTT
GTCTCCACATATATTGGTCTTCTCCTGAGACGATACACAACCACAGGCAACTTCCCCAAG
GCCATTGAGGTGGCTAGAACGTTCCAGGAGCACACTCAGATGCAGGAATTTATCAGCACC
AAGATTCACGAGCTTGAACAGCAGTACAAGATGGCTGGAAATGTGCCTGTTGGTGGAGAG
GAGGGTAACGAGCTGGACATTTTGGACAGTGCGTTGGTGCAGGAGTTGAAGTACATTCCT
GAAGATGAGGAAGACGAGGAGAACTTTTTGCAGTTGTAGACTAGATAGAACTGCCAGGTT
ATTACGAATGGAGTATATAGTATGAATGAATGATTTTATGTCTAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E21956g_CDS-001

Protein length: 493 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0E21956g_CDS-001 MLRSCGRAGKPLRRLAAVQTRGYRDPYHVSWHFNFKPEAVEPPTGHRLTDNLSIALNKRN
KKENGTGALKLALEICETSGPEAITPILYGQLLENVYEEVRGIPISKLRTYNTARLQVLE
SLSHFVPGLNARHYTYLIKLAHLTRRPKQVQDAWEQAMLNECDKTSALYNAYLKARTDAS
PRLRGNSDMPDLAGAKFWATNKDVSDSRAHALDPIEFMNEMRDRGIEPTRITYAIALNHY
GQQNNLPMAVSICENLWGVGFNSGKLEGPRVPHTSIMHPTPFTLISIIDAFGLNDRLVEG
KAYCETIADIYGIRLDSQLAQGYWTHLMRHALYTGIPHGQSSKEMCNSVWSNIVEFDYPP
SPAQYSLRIRDLLARDRLEDLQTLMHYALSVDKVGEMAAVVSTYIGLLLRRYTTTGNFPK
AIEVARTFQEHTQMQEFISTKIHELEQQYKMAGNVPVGGEEGNELDILDSALVQELKYIP
EDEEDEENFLQL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG