YALI0E21934g

Overview

Description weakly similar to uniprot|P23797 Saccharomyces cerevisiae YMR281w GPI12 N-acetylglucosaminyl phosphatidylinositol deacetylase
Locus type CDS
Locus tag YALI0E21934g

Location

Species Yarrowia lipolytica Positions 2588379..2589192
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 814 (nuc.)
Previous locus YALI0E21912g Next locus YALI0E21956g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E21934g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E21934gYALI0E21934g_mRNA-001YALI0E21934g_CDS-001

Nucleotide sequence

 

>YALI0E21934g
ATGCGAGTAGGACTAATTGTGCTCATCATTGGGTTTTTGTGGTGGACGCCCTCGTGGCTG
ACTAAGCGACTCAACAAGAACCACGCTGAGCCCACCATCATCGACAATCATATCACTCTT
CTCATTGCGCATCCCGACGACGAGGCCATGTTTTTCGGCCCTACCCTCGACCTTCTGACG
CGCAAAGAACACAAAAACAAAGTGTCTATTCTGTGTCTTTCTACTGGAAACGACGAGGGA
CTGGGCGAAATTCGAAAATCAGAACTTGTTGAGTCAGCGGCCATCTTCGGGGTGTCGGCT
GAAAAAGTTCACGTCCTGGACCGCCCAGAGCTGCAGGATGGTATGGAAAACGAATGGGAT
AGAACCATGGTTGCCGGAGTGATTGAGGAAGTTGTACCCACCACTCAGACTATTGTCACG
TTCGACGCCGAGGGTGTTTCGGGCCATATCAACCATAGATCAGTCTACTATGGAGCACTT
TACTACGCCAAAGAAAACCCTGGAGTCACTGTGTGGACTCTGGAGTCTGTGCCCGTGTAC
CGCAAATACACTGCAGTCATTGACGGATTTGTCACCACTTTGTTGCGGTCTATACTTCCC
TCAAACTCTCGAGTTTCCACCGCCGCAGATTACAAGGCGTACCAGGATGCTCGAAAGGCC
ATGGTAAAGGCTCATGTGAGTCAGATGAAGTGGTTCCGATACGGATGGATTACTTTGTCC
AGATACATGTGGTTTAATGAGCTGGTGAGAGCCTAGAGGAGGTATAGAAGTTATCTAACA
CACGTACATTGTTTTATTGCATTGAATCATTGGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E21934g_CDS-001

Protein length: 252 aa.
Product: Conserved hypothetical protein

>YALI0E21934g_CDS-001 MRVGLIVLIIGFLWWTPSWLTKRLNKNHAEPTIIDNHITLLIAHPDDEAMFFGPTLDLLT
RKEHKNKVSILCLSTGNDEGLGEIRKSELVESAAIFGVSAEKVHVLDRPELQDGMENEWD
RTMVAGVIEEVVPTTQTIVTFDAEGVSGHINHRSVYYGALYYAKENPGVTVWTLESVPVY
RKYTAVIDGFVTTLLRSILPSNSRVSTAADYKAYQDARKAMVKAHVSQMKWFRYGWITLS
RYMWFNELVRA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG