YALI0E21912g - SEC61

Overview

Description uniprot|P78979 Yarrowia lipolytica YALI0E21912g SEC61 Protein-translocation complex alpha subunit
Locus type CDS
Gene name SEC61
Locus tag YALI0E21912g

Location

Species Yarrowia lipolytica Positions 2585681..2587307
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1627 (nuc.)
Previous locus YALI0E21890g Next locus YALI0E21934g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E21912g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E21912gYALI0E21912g_mRNA-001YALI0E21912g_CDS-001

Nucleotide sequence

 

>YALI0E21912g
ATGGCCGGTGTAAGATTTCTCGACCTGGTGAAACCGTTCACGCCCTTCTTGCCCGAGGTC
CAGGCGCCCGAGCGAAAGGTGCCCTTCAACCAGAAGATCATGTGGACCGCCGTGACCCTC
ATGATTTTCCTGGTCATGAGTGAGATCCCTCTGTACGGTATCAACTCGTCAGACAAATCC
GACGCGCTGTACTGGCTGCGAATGATGCTTGCTTCCAACCGAGGCTCTCTGATGGAGCTC
GGTATCACCCCCATTGTGTCGTCCGGAATGGTGTTCCAGCTGCTTGGAGGAACCCAGCTG
ATCGAGGTCAACATGGACCTCAAGTCCGATCGAGAGCTTTACCAGACCGCCCAGAAACTG
TTTGCCATCATCCTCTCGCTTGGTCAGGCCACCGTCTACGTCTTGACTGGCATGTACGGT
CCCCCCAAGGATCTCGGTGTCGGTGTCTGTCTGCTTCTCATCTTCCAGCTTGTTCTTGCC
GCCCTTGTTGTTATTCTGCTCGATGAGCTGCTGCAGAAGGGTTACGGTCTCGGATCCGGT
ATCTCGCTCTTCATTGCCACCAACATCTGTGAGCAGATCTTCTGGAAGGCTTTTGCCCCC
ACCACTGTCAACAAGGGCCGGGGCTACGAGTTTGAGGGCGCCATTGTCGCGTTTGTGCAC
CTACTCTTCACCCGAAAGGACAAGAAGCGAGCCATCATTGAGGCTTTCACCCGACAGGAT
CTGCCTAACATGTCTCAGCTGGTGACTACTGTGGCCATTTTCGCTGCCGTCATCTACCTC
CAGGGCTTCCGAGTCGACATCCCCGTCAAGTCATCCAAGCAGCGAGGCCCCTACGGCGTC
TTCCCCATCAAGCTCTTCTACACCTCCAACCTGCCCATCATGCTGCAGTCCGCCCTGACC
TCCAACATCTTCATCATCTCCCAGATGCTGTTCAAGAAGTTCCCCACGAACGTGCTCGTC
CGGCTGCTCGGTGTGTGGGACGGCCGAGAGGGCATGCAGCAGCTCTTCCCCGTCTCCGGT
ATCGCCTATTACATGCAGCCCCCCTTCAACGCCAAGGAGGCACTGGCTGACCCCGTCAAG
ACCGTCATCTACATTGCCTTTGTTCTGGGCGTATGTGCCGTCTTCTCTGCCACCTGGATT
GAGATTTCCGGCTCTTCTCCCCGAGATGTGGCCAAGCAGTTCAAGGAGCAGGGTCTGGTG
ATTGCTGGCCGACGAGAGACTTCTGCCTACAAGGAGCTCAAGCGAATCATCCCCACCGCT
GCAGCTTTTGGAGGAGCCACCATTGGCGCTCTGTCAGTCGCCTCCGACCTGCTCGGAGCC
CTCAGCTCCGGAACCGGTATCCTCATGGCCGTGACCACAATCTACGGCTACTACGAGATG
GCCGCCAAGGAGGGCTACGTTGATGCTGCTATTTAATTGCGCTAGGGTGTAACTGACATT
CTCTGGTGTTGATTACGAAGTACGAGTCCGGTTTCGCAAAATTAATTGAAACACGGCCAT
TGATTGATCAAATTGTTGATGATCTGATGACCTACTAAACCCCCAAGTCATTGGTTCGGA
CTTGTCTCAGCATAAAATTAAAGACAACCAATAGATTCACATAGTGTATAATATTCGTGA
GTGGATA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E21912g_CDS-001

Protein length: 472 aa.
Product: Protein-translocation complex alpha subunit
Gene: SEC61

>YALI0E21912g_CDS-001 MAGVRFLDLVKPFTPFLPEVQAPERKVPFNQKIMWTAVTLMIFLVMSEIPLYGINSSDKS
DALYWLRMMLASNRGSLMELGITPIVSSGMVFQLLGGTQLIEVNMDLKSDRELYQTAQKL
FAIILSLGQATVYVLTGMYGPPKDLGVGVCLLLIFQLVLAALVVILLDELLQKGYGLGSG
ISLFIATNICEQIFWKAFAPTTVNKGRGYEFEGAIVAFVHLLFTRKDKKRAIIEAFTRQD
LPNMSQLVTTVAIFAAVIYLQGFRVDIPVKSSKQRGPYGVFPIKLFYTSNLPIMLQSALT
SNIFIISQMLFKKFPTNVLVRLLGVWDGREGMQQLFPVSGIAYYMQPPFNAKEALADPVK
TVIYIAFVLGVCAVFSATWIEISGSSPRDVAKQFKEQGLVIAGRRETSAYKELKRIIPTA
AAFGGATIGALSVASDLLGALSSGTGILMAVTTIYGYYEMAAKEGYVDAAI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG