YALI0E21890g

Overview

Description similar to uniprot|Q08702 Saccharomyces cerevisiae YOR258w
Locus type CDS
Locus tag YALI0E21890g

Location

Species Yarrowia lipolytica Positions 2583407..2584101
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 695 (nuc.)
Previous locus YALI0E21868g Next locus YALI0E21912g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E21890g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E21890gYALI0E21890g_mRNA-001YALI0E21890g_CDS-001

Nucleotide sequence

 

>YALI0E21890g
ATGTCATGGAAATACGCACTAGGTCAGTACATAAAGAGTCCTGAAAAATTCCCCAACGAT
GTGACTCTCGACACACCAGACTTTGTCGTGATCAAAGATGCGTTCCCGAAATCACATATC
CATTACCTGGTGTTACCCAAGGCTGTCAAGCCCGATACCCATCCTCTAAAGGCGTTTGAA
GACGACAACCTGTACGAAAAAACTCGTGCCATGGTGGAAAAAGTTGAGAAAATGGTTGCT
GTCGAGTTCATTCGTACAAAGGGATACTCCAAGGACGTGAAGATCCAGTCAGGCATCCAC
TCGGTGCCCAGCATGAATCATGTCCATGTCCATGTTATGACGACAGATCTGTCTTCTCCC
CGGCTCAAGAACCGCACACACTTCAACTCGTTCAGGACTGGCTTTTTTGTGCCATTCAGA
ACGATCCCGGATCTGAAAGTCCCAAGTCTTGACGCCTGGATGGTCTCACAGGAGAAACTC
ATCAAGGGGGACATTGTGGTGGATGGAGAGAACTTTGGGAACAAGTTTGCAAAGGCCAAG
AGAAGACTGGATGAGGATTTCCACAAAGCCACGATTCACGGTATTCCAGAGGAGGTGGAG
GATGATGATTATAGGGTGATGGAGATGATCTCTTAAGAGACAAGTGGCCATAGATAACGA
AGGACATTCATATGGAAATTGATGACATTATAACG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E21890g_CDS-001

Protein length: 212 aa.
Product: DNA 5' AMP hydrolase involved in DNA repair, putative

>YALI0E21890g_CDS-001 MSWKYALGQYIKSPEKFPNDVTLDTPDFVVIKDAFPKSHIHYLVLPKAVKPDTHPLKAFE
DDNLYEKTRAMVEKVEKMVAVEFIRTKGYSKDVKIQSGIHSVPSMNHVHVHVMTTDLSSP
RLKNRTHFNSFRTGFFVPFRTIPDLKVPSLDAWMVSQEKLIKGDIVVDGENFGNKFAKAK
RRLDEDFHKATIHGIPEEVEDDDYRVMEMIS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG