YALI0E21868g

Overview

Description highly similar to uniprot|P53549 Saccharomyces cerevisiae YOR259c CRL13 26S proteasome regulatory subunit
Locus type CDS
Locus tag YALI0E21868g

Location

Species Yarrowia lipolytica Positions 2581964..2583239
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1276 (nuc.)
Previous locus YALI0E21846g Next locus YALI0E21890g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E21868g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E21868gYALI0E21868g_mRNA-001YALI0E21868g_CDS-001

Nucleotide sequence

 

>YALI0E21868g
ATGGAAAACGACCCGCTGCTCGCAGCTCTCAACCAGGAGGCGCCCGAGGTGGCTGCCACA
CCCACAGATCCCGAGCGGGAAAAGGCGATCGAGTCGTTCAAGAGAAAACTCAAGGAGCAT
CGAGAGTACGAGGTCAAGCTCAAGGACTTGCGACTGGGCATCAGAGACCTCGAGCGCAAA
TTCGACAAGACCGAGGACGACATCAAGGCGCTACAGTCGGTAGGCCAGCTGATTGGCGAG
GTTCTTAAGCAGCTGGATGAGGAGCGGTTCATCGTCAAAGCCTCCAACGGCCCCCGATAC
ATTGTGGGCTGTCGGTCCAGCATCAAGAAGGAGAAGCTGCTGCAGGGTGTGCGTGTGTCT
CTGGATATGACCACTTTGACTATCATGCGAATTCTTCCCCGAGAGGTCGATCCTCTTGTC
TACAACATGACCACGTTTGAGCCTGGAGAGCTGACCTTCTCCGGTATCGGTGGCCTCAAC
GAGCAGATCCGTGAACTCAGAGAGGTCATTGAGCTGCCTCTGAAGAACCCCGAGCTGTTT
TTGCGAGTCGGAATCAAGCCTCCCAAGGGTGTGCTTCTGTACGGCCCTCCCGGAACAGGA
AAGACCCTGCTGGCCAAGGCCGTGGCCGCCACTATTGGCGCAAACTTCATCTTCTCGCCC
GCCTCAGCTATCGTCGACAAGTACATTGGAGAGTCTGCCCGTCTGATTCGAGAAATGTTC
GGATACGCCAAGGAACACGAGCCCTGTATCATCTTCATGGACGAGGTGGACGCCATTGGA
GGACGTCGATTTTCCGAGGGAACCTCCTCCGACCGAGAAATCCAGCGAACGCTCATGGAG
CTGCTGAACCAGATGGACGGTTTCGACTATCTCGGAAAGACCAAGGTCATCATGGCCACC
AACCGGCCCGATACTCTGGACCCCGCCCTGCTGCGAGCAGGCCGTCTGGACCGAAAGATC
GAGATCCCACTGCCCAACGAGGCCGGCCGTCTGGAGGTGTTTAAGATCCACGCTGCTGGC
GTTCAGAAGCAGGGCGAAATCGATTACGAGGCCCTGGTCAAGATGAGCGACGGTTTCAAC
GGAGCAGATATCCGAAACGTGGTCACCGAGGCTGGCTTCTTTGCCATCCGAGACGATCGG
GACTACATTGTTCAGAACGATCTGCTCAAGGCCTGCAGAAAGGTGTCCGAGAACAAGAAG
CTGGAGGGTAAGCTCGAGTACGAGAAGTTGTAGTAGACTAGTTAAGCATTTAATCGCAAG
TGAGAGTGTAGTTTGC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E21868g_CDS-001

Protein length: 411 aa.
Product: ATPase of the 19S regulatory particle of the 26S proteasome, putative

>YALI0E21868g_CDS-001 MENDPLLAALNQEAPEVAATPTDPEREKAIESFKRKLKEHREYEVKLKDLRLGIRDLERK
FDKTEDDIKALQSVGQLIGEVLKQLDEERFIVKASNGPRYIVGCRSSIKKEKLLQGVRVS
LDMTTLTIMRILPREVDPLVYNMTTFEPGELTFSGIGGLNEQIRELREVIELPLKNPELF
LRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASAIVDKYIGESARLIREMF
GYAKEHEPCIIFMDEVDAIGGRRFSEGTSSDREIQRTLMELLNQMDGFDYLGKTKVIMAT
NRPDTLDPALLRAGRLDRKIEIPLPNEAGRLEVFKIHAAGVQKQGEIDYEALVKMSDGFN
GADIRNVVTEAGFFAIRDDRDYIVQNDLLKACRKVSENKKLEGKLEYEKL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG