YALI0E21846g

Overview

Description similar to uniprot|P09032 Saccharomyces cerevisiae YOR260w GCD1 translation initiation factor eIF2bgamma subunit
Locus type CDS
Locus tag YALI0E21846g

Location

Species Yarrowia lipolytica Positions 2579634..2581146
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1513 (nuc.)
Previous locus YALI0E21824g Next locus YALI0E21868g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E21846g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E21846gYALI0E21846g_mRNA-001YALI0E21846g_CDS-001

Nucleotide sequence

 

>YALI0E21846g
ATGGGAGCCGACTTCAAAGTGTTCATTCTGTGCGGCCAGGGCAAAAACATGGCACCTCTC
TCGTCCGTGAGAGCGTCTGGAGTGCCCAAGGCCCTTCTTCCCATGGCCAACGTGCCTGTG
ATCGACTACACCCTCAAATGGTGTGAGACCATCCCCAACCCCAAGGTGTTTGTGTGCTGT
TCTACAGCTGACGAGGCGGAGATTTCCGCCTACGTGGACTCTTTCAAGGCTGAGCACTCC
ACCTCAGTTGTGGCTTCCAACGTGACTATCTGTTCCAAGACCGATGCGAAGTCTGGAGAC
TTCATTCTGGAGCTGACTCGAGGGGAACCCTCTGATTTCATTGTGGTTGGCTGCGATTTT
ATCACAGACATTCCCGCCAGCTCGCTGGTCGACACCTACCGAAGCCGAGACTCGGACTCG
CTTCTCACAGCCTTCTACTACCCCAATACCCTGGAGAACGTGGACAAGAAGTCATTGCTC
AAGGACGTGACGGTGCACTCATCGCTGGACTCGCGAACCCCGCGGCTGCTGGACTCGTAT
TCGCGTGACTACATTGAGAACAAGAAGACCATGCCCATCCGCCGATCCATGCTGTGGCAC
TTCCCTAAGTCTTTGGTCTCCACACAGCTGCTCAATGCGTCCGTCTACTTCTGCACTGCC
GACGTGTGTAGAGTCATCACCGAGACTCAGGCTGCCCCTGAGGAGGATTCCACAGACGAA
GATCCCGACACCCGATCTTCGTCGCCTGTCAGACAAGAACAGGAGGAGGCACACACCATT
CTGGCCAAAGGCCGACAGTGGGACCGAGTGGTTCGAGACATTGCCCGACGGTCGTGGGCA
CATGCGAAGCCGCTCAAGTCTGTGTCTCTGTGCGTTCTGGACTCCAATACCTTTGCACGA
GCAAACAACCTGTCTGCATACATGGAAATGAACCGAGTGATTCTGAAGGCAAGAGCCAAG
GCCAACGCCACTGCCCAGAAGCCCGCTCCAGCTGTTAAGGGAGCTGCCACTGTTGGTGTC
GACTCTCTGGTCGGCGAAGAGACCCAGCTGGGCGAGCGAACCAGTATAAAGCGATCTGTG
GTTGGAAACAACTGCACCATCGGCAAACGATGTCGAATCAACGGCTGTGTCATCTTTGAC
GGTGCTTTCATTGCCGATGACGTTACTCTGGAGAACTGTCTGGTCGGAACTAAGACCACA
GTCGGTACCAAGGCCAAACTCACGGGCTGCAATGTTGAAGGAGGATACAAGGTGGAGGCT
GGCAAGGTGGCCAAGAACGAAACCATGCTACAGCTGTCCCTGGAGGGTTTGATGGAGTCC
GACGAATACACTGACGACCATGACGAAGATGACGATGATGACGATGACAGCGAAATGGGC
GACTCGGACGATTGGTCCGTCAGCGGAGGAGACGACTACGATGATGATGATGGGCTCTTC
GATCGGTCTTAGAAAGACAAGTATAGCTAATGTATGTTGGATAGAGTATGGAGTAATTAC
AGACTTGATCTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E21846g_CDS-001

Protein length: 484 aa.
Product: Gamma subunit of the translation initiation factor eIF2B, putative

>YALI0E21846g_CDS-001 MGADFKVFILCGQGKNMAPLSSVRASGVPKALLPMANVPVIDYTLKWCETIPNPKVFVCC
STADEAEISAYVDSFKAEHSTSVVASNVTICSKTDAKSGDFILELTRGEPSDFIVVGCDF
ITDIPASSLVDTYRSRDSDSLLTAFYYPNTLENVDKKSLLKDVTVHSSLDSRTPRLLDSY
SRDYIENKKTMPIRRSMLWHFPKSLVSTQLLNASVYFCTADVCRVITETQAAPEEDSTDE
DPDTRSSSPVRQEQEEAHTILAKGRQWDRVVRDIARRSWAHAKPLKSVSLCVLDSNTFAR
ANNLSAYMEMNRVILKARAKANATAQKPAPAVKGAATVGVDSLVGEETQLGERTSIKRSV
VGNNCTIGKRCRINGCVIFDGAFIADDVTLENCLVGTKTTVGTKAKLTGCNVEGGYKVEA
GKVAKNETMLQLSLEGLMESDEYTDDHDEDDDDDDDSEMGDSDDWSVSGGDDYDDDDGLF
DRS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG