YALI0E21626g

Overview

Description similar to uniprot|P47122 Saccharomyces cerevisiae YJR072c
Locus type CDS
Locus tag YALI0E21626g

Location

Species Yarrowia lipolytica Positions 2560910..2562307
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1398 (nuc.)
Previous locus YALI0E21604g Next locus YALI0E21648g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E21626g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E21626gYALI0E21626g_mRNA-001YALI0E21626g_CDS-001

Nucleotide sequence

 

>YALI0E21626g
ATGTCCGATTCGACCGATACTCCCGCGCCTCCCGTCCATGTCGAGTCCGACACTCCCACT
ATCTTCTGCGTGGGAATGGCCGGCAGCGGCAAGACAACTTTTATGCAGCGGCTCAACTCG
CACCTTCATTCTACGGCCAAGGACGGCAAGAAGCCGTATGTGATAAACCTGGACCCCGCT
GTGCTCAAGGTGCCGTTTCACACCAACATAGACATCCGAGACTCGGTAAAGTACAAAAAA
GTCATGGAAAACTACAATCTGGGCCCTAACGGAGCCATCATGACCTCTCTCAACTTGTTT
TCCACCAAGATCGACCAGGTGCTGGGTCTCATTGAGAAGCGAGACTCTGACGGATCCATC
TCCAACATTCTTGTCGACACCCCAGGTCAGATTGAGTGTTTCATTTGGTCCGCATCAGGA
ACCATCATCACCGATTCGCTAGCCACAACCTTCCCCACAGTGCTGGCATACATTGTTGAT
ACTCCCCGAGCCACCTCACCCGCAACCTTCATGTCCAACATGCTATACGCATGCTCGATT
TTGTACAAGACCAAGCTGCCCATGATCATTGTTTTCAATAAGTGCGACGTGGCAGAAGCT
GCGACCCTCAAGGAATGGATGCGGGACTTTGAAAAGTTTCAGGAGGTGCTGCGAAATGAC
CCTGAGTTGTCGGGCGAAGGAGAGAACTCCAGTGGCTACATGGGCTCGCTCATGAACTCG
CTGTCACTCATGCTGGAGGAGTTCTACAACCATCTGGATGTGGTGTCTGTCAGTTCTTAC
ACAGGAGAAGGCTTTGACGACTTCATGGAGGCCGTGGGACACAAGGTCAAGGAATACAAG
GAGGACTATGCTGAAGAGCGAAAGCGAGTAGTCGCACAGCGAGAGGAGGACAAGAAGAAG
CAGAAGGCAAAGGACCTCACTCGGCTCATGAACGATATGGGTATCGAGGAGCCCAAGGGA
GATAACCCCAGAGACGAGGTTGGAAAGCCCGACAGAATCGATACTCTATCAGATATGGAC
ACTGACGAGGATGATGACGACGAGGATACAGGTATGGTCGATCGAGACGATGACGAACCT
GGTGCCGAGGCTGCCGGTCCGGGTCTGGATGCAGCAGACGAGGCTGTTCATGAACGGTAC
AAGGCAGCCCTGGCTGTGGCTCAGCAGGAGGCCAAGGATCAGAAGACTCTTGATAGGCTG
GAGGGATACATGAAGGGCCAGAAGAAATGAATGGTGCTGTACAAGTAGATACATTGGAAA
ATAGGATAATAACGATGATATGGTATAAATACCAGAGTGTATACAATGGTCCTGTATCAA
AAACGTACTTCCACCACTCTTGGCAATACCTCTTACGAATACCCTACAAGTACACAGTAA
TACATCTATAATCTAATC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E21626g_CDS-001

Protein length: 410 aa.
Product: Member of the conserved GPN-loop GTPase family, putative

>YALI0E21626g_CDS-001 MSDSTDTPAPPVHVESDTPTIFCVGMAGSGKTTFMQRLNSHLHSTAKDGKKPYVINLDPA
VLKVPFHTNIDIRDSVKYKKVMENYNLGPNGAIMTSLNLFSTKIDQVLGLIEKRDSDGSI
SNILVDTPGQIECFIWSASGTIITDSLATTFPTVLAYIVDTPRATSPATFMSNMLYACSI
LYKTKLPMIIVFNKCDVAEAATLKEWMRDFEKFQEVLRNDPELSGEGENSSGYMGSLMNS
LSLMLEEFYNHLDVVSVSSYTGEGFDDFMEAVGHKVKEYKEDYAEERKRVVAQREEDKKK
QKAKDLTRLMNDMGIEEPKGDNPRDEVGKPDRIDTLSDMDTDEDDDDEDTGMVDRDDDEP
GAEAAGPGLDAADEAVHERYKAALAVAQQEAKDQKTLDRLEGYMKGQKK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG