YALI0E21648g

Overview

Description similar to uniprot|A3LYE0 Scheffersomyces stipitis PICST_48448 hypothetical protein
Locus type CDS
Locus tag YALI0E21648g

Location

Species Yarrowia lipolytica Positions 2562692..2563440
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 749 (nuc.)
Previous locus YALI0E21626g Next locus YALI0E21670g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E21648g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E21648gYALI0E21648g_mRNA-001YALI0E21648g_CDS-001

Nucleotide sequence

 

>YALI0E21648g
ATGAACCTCATCATTCCCTCGGTGTCCTGCGGCAACATTCCCCAGCTGACCGTTGATCTG
CTGATTCACTCGCTAGACTTTTCTCTCGTCTCCAGGCTCGACGACTCGTACCTCCATCCA
TTCGCCTCCCCAGTGGATCATGTTGAAGGCCAGCAGGTTGAATCTGGACACGTTGCCACG
GCCATTGAGCTCTACCGATCCGAGAAACTCGACACAGACGTGATTCAGATTCGCTCTCCA
CCAATTGCGGACTTCAAACAGGCCTTTTCTGCCCAGCTGGAAGAGCTGACCAAAAAGTAC
ACCAACGTCATTGTGCTTGGATCGTCAGACGCAGGACTCAGAGAACAAGTGGGCGCACCC
AAAATCGAATACTACACATCCGACCTTGCCACTCGATTCCAGACCCTGTCGCTGGATGGC
CCCAAGGTCAAAGAAGTGCCTGCGGTGTTGCCAGGATCAGGCTACTTTAGATCACTGGTC
AAGGGTCCTGCTCTGGGACTGGTCTTCTTTGCCTACGAAGGAGACAACTTTGGAGATGCA
CATCAGCTGGCTGATGCTGTGATCAGGTTACTGGGAGGATCTGAGATGAAGTGGACCCAG
CCTGTGAGTTGGCAGGGAGCCTACGGACATGACGCTCCCCTCGGAGTTGAGCAGGGTGTT
TATTGCTAGACAAATAATGAACGGAAACTACTAGTTGGAGTTGTAAATGCAATGAGCAAT
ACTGTAAACAATTAATCATGACCAATTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E21648g_CDS-001

Protein length: 223 aa.
Product: Conserved hypothetical protein

>YALI0E21648g_CDS-001 MNLIIPSVSCGNIPQLTVDLLIHSLDFSLVSRLDDSYLHPFASPVDHVEGQQVESGHVAT
AIELYRSEKLDTDVIQIRSPPIADFKQAFSAQLEELTKKYTNVIVLGSSDAGLREQVGAP
KIEYYTSDLATRFQTLSLDGPKVKEVPAVLPGSGYFRSLVKGPALGLVFFAYEGDNFGDA
HQLADAVIRLLGGSEMKWTQPVSWQGAYGHDAPLGVEQGVYC*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG