YALI0E21604g

Overview

Description similar to uniprot|Q10449 Schizosaccharomyces pombe mug157 Meiotically up-regulated gene
Locus type CDS
Locus tag YALI0E21604g

Location

Species Yarrowia lipolytica Positions 2559169..2560930
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1762 (nuc.)
Previous locus YALI0E21582g Next locus YALI0E21626g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E21604g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E21604gYALI0E21604g_mRNA-001YALI0E21604g_CDS-001

Nucleotide sequence

 

>YALI0E21604g
ATGGCCTGGTACCACCGTCCAAAAACAGTGCTGGCGCTCGTTCTGTGGCTTGTAGTCGCA
GGTTTCGTGCTCAACACTCTTCTTCAACTAGGAGACCAAACCACCGACCCAGATCTGTCT
TCGCCTAAAGACGCGCGAGAGGAGGAGGACCCGCATTTTCTAGACACAAAACGACGCCCG
CTTCTCCCCCAAGATCGCGAGTTTGAAGCTGCCTGGAAGGCCAGAGGCTCCTGCCCCGAT
TACGAGGCGTACTCTCAGACTAAACATGAACCCTTCAGCGACGGTCCTCTACGGTTGCCG
TTCATGCGACCGAGCAAGAAGTGTCGTACATTTCATTCGGATGAGGTTGAGAAAACAATT
GAGGAGTTCACTGCCAAAATGGCTGACCCAGATCTCGCCAGATTGTTTGAAAACGCCTTC
CCCAACACCCTCGACACCACTATCCGGTGGCACAGACGCCAGTCGGAAGAGGCGTCTGCA
CAGACTTTTGTCGTGACTGGAGACATCAACGCTGAGTGGCTCAGAGACTCCGCTTGGCAA
TTGTCACCTTACAAACGCTTCATTTCCACCGACCCACACATCCAACAGCTGTACAAGGGA
GCCATCAATACCCAGGCCTCCTACATTCAAATGTTCCCATACTGCAACGCATTCCAGCCT
CCACGAGCGTCGCGAATCAGGCCGCAATTCAATGCAGGAGAAGATAAAGTGTCGCCTCCT
GTGGACCACAATGTCGTGTTTGAGTGCAAGTATGAGCTCGACTCTCTGGCCTCGTTTCTG
ACGCTATCCAACGACTACTACGAGGAAATCAAGGACGACAAGGAAGAAGTTGACGACACA
TTCTCTGGGAACGACGGAGCCTGGTACAGAGCTATTGCCAAGCTGACCCGAGTGCTAGAA
GACCAGTCTCAGCCTACCTACAACGAGCATGGCAATATTCTCAAGACCAGATACTCTTTC
AAGCGACACACAGATCTTGGAACCGAGACTCTCAACCTAAATGGTATTGGTAACCCCGTT
GCTGATGGAACTGGACTCATTCGTTCGGCTTTCAGACCCTCGGATGATGCCACAATCTTC
CAGTTCTTCATTCCTGCCAACGCCCACATTGCCGTGGAGCTCAAACGAGCCGCCAAGATT
TTTGCTGCGCTTGACAGAGACGATCTGGCGAAAGAGGTGCTGGATTGGGGCAACCAGATC
GAAGAGTCCATTTGGAAACACGCCGTATATAAGCATCCCAAGTTTGGCAAGGTGTTTGCT
TACGAGATCGACGGATTTGGAGCCATCACCAATATGGACGACGCGAACATTCCCTCTCTA
CTCTCTCTTCCTGTTTTGGGTTTCGTGGACAAGGACAACGAGGTGTACAAGAACACACGA
AAGATGATTCTGTCCAAGCAGGGCAACCCTTACTATCTGACTGGACGAGCGTTTTCCGGT
ATTGGAGGTCCCCATGTTGGTATCAGAAATGCCTGGCCCATGTCCCATACCATGGCTATT
CGTACCGCCATGAGTGATGACGAGATTCTCGACTCGCTCAACCTACTGAAGACCACCACC
GCCGGCTTGGGACTGATGCACGAGTCCATTGATGTACATGACTCTACCAAGTTTTCCCGT
CCTTGGTTTGCCTGGTGCAACTCTGAGTTTGCCAAGGCCATCTTTTACCTGGCAGACAAC
AAGCCTAACCTGATTTTTGGACCCAAAAAGGCGAACCAAAAAGAAGATGAATAACGAATT
TGATTAGATTATAGATGTATTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E21604g_CDS-001

Protein length: 578 aa.
Product: Meiotically up-regulated gene, putative

>YALI0E21604g_CDS-001 MAWYHRPKTVLALVLWLVVAGFVLNTLLQLGDQTTDPDLSSPKDAREEEDPHFLDTKRRP
LLPQDREFEAAWKARGSCPDYEAYSQTKHEPFSDGPLRLPFMRPSKKCRTFHSDEVEKTI
EEFTAKMADPDLARLFENAFPNTLDTTIRWHRRQSEEASAQTFVVTGDINAEWLRDSAWQ
LSPYKRFISTDPHIQQLYKGAINTQASYIQMFPYCNAFQPPRASRIRPQFNAGEDKVSPP
VDHNVVFECKYELDSLASFLTLSNDYYEEIKDDKEEVDDTFSGNDGAWYRAIAKLTRVLE
DQSQPTYNEHGNILKTRYSFKRHTDLGTETLNLNGIGNPVADGTGLIRSAFRPSDDATIF
QFFIPANAHIAVELKRAAKIFAALDRDDLAKEVLDWGNQIEESIWKHAVYKHPKFGKVFA
YEIDGFGAITNMDDANIPSLLSLPVLGFVDKDNEVYKNTRKMILSKQGNPYYLTGRAFSG
IGGPHVGIRNAWPMSHTMAIRTAMSDDEILDSLNLLKTTTAGLGLMHESIDVHDSTKFSR
PWFAWCNSEFAKAIFYLADNKPNLIFGPKKANQKEDE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG