YALI0E21582g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0E21582g

Location

Species Yarrowia lipolytica Positions 2554948..2556787
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1840 (nuc.)
Previous locus YALI0E21560g Next locus YALI0E21604g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E21582g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E21582gYALI0E21582g_mRNA-001YALI0E21582g_CDS-001

Nucleotide sequence

 

>YALI0E21582g
ATGGAAGTGGTAGCAGCAGCCATGGCTCTGGACGATAAGCGCGACGTGTCGCCGTCGTCG
TCGCCTGCCAAAGATAACCCGCTGCATCAGCCGTTATCAGAGCTTTTTTCCGACCTTTTA
CAACAACATCTGCCCGCCAAAACCCGACGTCTTCTGGGACCTCAGAAATGGAACCAGCTG
GAGACAGACGACAAGGAGCTCATTGAAAAGCGACGCAAAGAGATTGTCAACGACTTGGAG
ACGCACTTTGCCGCCAAGAAGGACGAGTTCCAGACACTGTTGGAATCAATCGTGGCCGGC
CAAGAGTCGTCAGAAGAGGATAAGGGGACGCAGGAGGAGCCGCTGGACATTAATAACACG
GCAGCAATCAACGCGTTGGAGCAGTCGCGGCGCAACTCGCTGACTAAGCCACTCAAGTCG
TCCCTCAAGGCCGACGGAGACGCTACCAAGAAGAAGGTCATGTTTGAAGACAAGGACGAG
GATAAGGAGGATGAGGAGAAGGAGAACAATAAAGGACAGGCAAAGGACGCCCCAGAAGAC
GATAAGAACGACAAACCGACTTCATCATCCGTCAAGTTCAATGAAAACTCGTTTTCGGAA
CCGTTTCCAGAACTGCCCAAGGGTGCACCCACGCATCCAGACGCCAAAGATCCGGATTAC
ATCCGTCCCACCGCAGATACAGGCGTACCCACCGTTAGAGAAGACGTAATGGCAGCCCTG
TACTCGTCGCCACAAAAACCCACGCTTCTGGGTCCTCAACTTGACTTGCCTGCGTCCAGC
TACAAGGAGAAAAAGAAGTCCTTGGGGCCCAAGCCTAGGCTGTATGGACAGCACGATAAT
TCCAACGGAGACTCTGAAGACATGTTCAACTTTGATGAAGAGCTCCCTGAAGACGATCAG
GACGTTGATCATCATAACAAGCCAGACACAGCTACTTCTGCCACCCATCGTCGGGCCTCG
GTAGGCGGAGATGCCTCGGATCTTCCAGACAAGCTCAAAAAGGAGTACCTCTCTTACTTT
GGACCCATCGAGGAGGATGTGGAGAATGTTACTGAAGACTCTGTCACTGCCCATTCACGT
ATCCAGATGTCTTCTACAGCTCCCACCGCTCCCATGGTCGTAGGATCACTTGGAAAGCGT
CCCCAGTCTGTCTCAAAGTACGGCTCCGACACCTCCTCCACTGGAGCGTTCGACATGTGG
GTTCACGAGGAGGATAATGGCGACGATAGGTCGTTTCTGGGCAAGAACTCGTTCAATCCT
CGAATTGGTGAGATTCCCGAGGAGGAAGCATCGTTCTCTGAAATTGTCGGTTCTCCCCAC
GCAAAGTCGTCTGCCATGGCCGTTGGATCTGTTCCTTACATCCAGAACCCTCTGTCCAAC
TCTTACAAGCCCAACAGAGGTATCGGGCAGGCATCTGTGTCTCGATTCCCGTCGGGAACG
TCTTTTTCGGGCGTTGGGCTCACGGAAAAACAGCAACAGCGAATCGAAAGTGAACCTGCT
GCTGCGGGTAACCGTCGGCTGACTCTGGAGGAGCGCGATGACATCGACGTGAGTCATTCG
TTGGATGAGGAAATCAAGATCAACGAGATCCGGGAGTTGGCTCCTGGTAAGATGAGTTTC
TCGCAGCGAATGATGTACGAGAAGGATGGTCGGGACACTCAGAAGATTAGCAGTAGTCCT
TACATGTAGTCTGACGAAGGATCATGTTTTTGGGGGTGGTCTTCAATAGTTTCGGCTTAA
TTTGCTAGCGACACGTAATCAGATATCGATAGACGGTGGTTGAAATAGCTCTAGGCTGTA
TCTAGATATAGATTAATGAATTGCATCATTTATGGTAGTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E21582g_CDS-001

Protein length: 563 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0E21582g_CDS-001 MEVVAAAMALDDKRDVSPSSSPAKDNPLHQPLSELFSDLLQQHLPAKTRRLLGPQKWNQL
ETDDKELIEKRRKEIVNDLETHFAAKKDEFQTLLESIVAGQESSEEDKGTQEEPLDINNT
AAINALEQSRRNSLTKPLKSSLKADGDATKKKVMFEDKDEDKEDEEKENNKGQAKDAPED
DKNDKPTSSSVKFNENSFSEPFPELPKGAPTHPDAKDPDYIRPTADTGVPTVREDVMAAL
YSSPQKPTLLGPQLDLPASSYKEKKKSLGPKPRLYGQHDNSNGDSEDMFNFDEELPEDDQ
DVDHHNKPDTATSATHRRASVGGDASDLPDKLKKEYLSYFGPIEEDVENVTEDSVTAHSR
IQMSSTAPTAPMVVGSLGKRPQSVSKYGSDTSSTGAFDMWVHEEDNGDDRSFLGKNSFNP
RIGEIPEEEASFSEIVGSPHAKSSAMAVGSVPYIQNPLSNSYKPNRGIGQASVSRFPSGT
SFSGVGLTEKQQQRIESEPAAAGNRRLTLEERDDIDVSHSLDEEIKINEIRELAPGKMSF
SQRMMYEKDGRDTQKISSSPYM*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG