YALI0E21560g

Overview

Description weakly similar to uniprot|P25608 Saccharomyces cerevisiae YCR102c similarity to C.carbonum toxD gene
Locus type CDS
Locus tag YALI0E21560g

Location

Species Yarrowia lipolytica Positions 2553940..2554962
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1023 (nuc.)
Previous locus YALI0E21549g Next locus YALI0E21582g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E21560g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E21560gYALI0E21560g_mRNA-001YALI0E21560g_CDS-001

Nucleotide sequence

 

>YALI0E21560g
ATGCGACAGAGGGGGATAAAACGACTACGAGAAGACAAGGGAAGATGTCTGGTAGTGACG
GAAAAACATCACTACGAGGTGAATCATGTGCCGATCCCTGTCCCTATGCCACACGAAATT
GTCGTCAGAAATTTGCTAGTGGGAGTCAATCCCGTTGACTGGAAATCGGTCGAATACGGC
TTTGGCATACATGGATACCCCTGGATCAATGGGCGGGAGTCTGTGGGGGTTGTGGTGACA
ATAGGAGATGCTGTGAAGAAGTTTGGAGTTGGCTCCAGAGTCCTGCTGGTGAGCACAAAC
TACCGCGATCTGCGTACGTCGACTTTCCAGGAGTTCACTGTATGTCCTGAACATTTGGCA
GCCGATGTGGGCGGAATGGATTTCAGTGAAGCAATTGGTTATGGAGTGCCTTTGATTAGT
GCTTATGTTGCTCTAGATGGATTGAAAGCTGGCTCTGGTACAGTGCTCATCTGGGGAGGA
GCTAGTTGCACAGGAGTGTTTCTTCTTCAGCTGGCCAAGAGAAAAGGACTCAGGGTGGTC
AGTATAGCTTCTGAAAGGTCACACACGTATGTCAAATCATTTGGAGCTGATCTTGTTCTC
AACAGAAACAAAATCCTGACCGCAGAAGATATCCTAAGTGCAATCACTGAGCCAATAGTT
TACGCAATTGACTGTATAGGGAAGGAGTCAGCGTCTCTGGTCCTTCAAGCGTTGGAACTG
TGCAAGCACTCCGACCACTTCATACCTCAAATGGTCTGCTTAAACGCTTCGTTACACTCA
GATACAGTCTCTGTCAGGAGTCTCAATCTCAAAAAAGTACACGAAAACGAAGACTATGGC
CGTCAAGTGACACTAAAGATTGAACAACTCATCCACGAGCTGAAACCACCCAAAATTCAC
TGCTACTCTGGTCTAGAAAACATACCCAGCGGACTCGGTCATGTGAAACAGGGACATCCA
GGTAAGACTGTCGTTGGGATCGAGTACGTCGACTACAGTTCACACGCTCACTACCATAAA
TGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E21560g_CDS-001

Protein length: 341 aa.
Product: Conserved hypothetical protein

>YALI0E21560g_CDS-001 MRQRGIKRLREDKGRCLVVTEKHHYEVNHVPIPVPMPHEIVVRNLLVGVNPVDWKSVEYG
FGIHGYPWINGRESVGVVVTIGDAVKKFGVGSRVLLVSTNYRDLRTSTFQEFTVCPEHLA
ADVGGMDFSEAIGYGVPLISAYVALDGLKAGSGTVLIWGGASCTGVFLLQLAKRKGLRVV
SIASERSHTYVKSFGADLVLNRNKILTAEDILSAITEPIVYAIDCIGKESASLVLQALEL
CKHSDHFIPQMVCLNASLHSDTVSVRSLNLKKVHENEDYGRQVTLKIEQLIHELKPPKIH
CYSGLENIPSGLGHVKQGHPGKTVVGIEYVDYSSHAHYHK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG