YALI0E21417g

Overview

Description similar to uniprot|P06844 Saccharomyces cerevisiae YDR392w SPT3 general transcriptional adaptor or co- activator
Locus type CDS
Locus tag YALI0E21417g

Location

Species Yarrowia lipolytica Positions 2544245..2545294
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1050 (nuc.)
Previous locus YALI0E21395g Next locus YALI0E21439g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E21417g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E21417gYALI0E21417g_mRNA-001YALI0E21417g_CDS-001

Nucleotide sequence

 

>YALI0E21417g
ATGGCCGAAAAAGACAAGTACAAGTACCGGATCGAGATCCAGCAGATGATGTTCGTCATT
GGCGAGACCAACGACCCACCCACGGAAACTACGTCGTTGGTCGAGGACATTGTGCGGTCT
CAGGTGATTGAGATGCTGCTCCAGGCGACCATTCTTGCCCAGAAGCGTGGAGCTCGGTCC
ATGGCCACGGAGGACTTCATTTTTCTCATCCGTCATGACGCCGCCAAGGTTTCGCGTCTC
AAGACGTATCTGACCTGGAAGGATGTGCGTAAGAACGCCAAAGATCAAGAAGCTGGAGGA
CTTGAAGGGACGGACATTTTGGAGAACGGAGGCGCTGGAGCCGAAGGGGCTGCCCCTGGA
GGGGCCCCCGGGGGTCCCGGAGCACCACCAAACGCCCCACCAGGTCAGGCACCTCTTGCT
ACAGCCAAAAGGTCCAAGGTGAAGTTGCCATGGGAACTGCAGTTTATGTTCTCGGAACAG
CCGCTACAGGACGGAGACGACGAAGAAGACGACGAGGCAGAGGCTAACAGTGCAACAATC
GAGCGTCTCAAGACCGCCGACGAGCGTACAAAGGACATGACGCGAGAGGAGTACGTTCAC
TGGTCGGAATGCAGACAGGCATCGTTTACTTATAGAAAGGCCAAGCGGTTTCGAGACTGG
GCGGGAATCGGTGCTCTGACAGACACACGACCGCATGACGATATCATTGATATTCTGGGT
TTCTTGACGTTTGAAATCATCGCCAGTATCACAGAAGAGGCTCTCAAGGTGAAGGAGGAG
CAAGAGGAGGTGGAGCGGTCTAACGGGGACCAGCCACGAAAAAAGCAAAAGATGTCGCAC
TCGTTGTTCGATGGACCCGATGAGGAGGCACGTCCAATATTGGCGTGCCACGTTCAGGAG
GCATACAGACGATTGCAACATACCTCTGCCAAGCAGAAGAGTTTGAGACGGTACCGAGGA
GGACTGGTCAAGGTGAAGACTACTTTGATTTAAGGGAATCGGAGGACTAGATGTAATTTA
TTGATGTATTTGTATTAGCTGAGGATCTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E21417g_CDS-001

Protein length: 331 aa.
Product: Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, putative

>YALI0E21417g_CDS-001 MAEKDKYKYRIEIQQMMFVIGETNDPPTETTSLVEDIVRSQVIEMLLQATILAQKRGARS
MATEDFIFLIRHDAAKVSRLKTYLTWKDVRKNAKDQEAGGLEGTDILENGGAGAEGAAPG
GAPGGPGAPPNAPPGQAPLATAKRSKVKLPWELQFMFSEQPLQDGDDEEDDEAEANSATI
ERLKTADERTKDMTREEYVHWSECRQASFTYRKAKRFRDWAGIGALTDTRPHDDIIDILG
FLTFEIIASITEEALKVKEEQEEVERSNGDQPRKKQKMSHSLFDGPDEEARPILACHVQE
AYRRLQHTSAKQKSLRRYRGGLVKVKTTLI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG