YALI0E21439g

Overview

Description weakly similar to uniprot|Q12021 Saccharomyces cerevisiae YDR030c RAD28 protein involved in the same pathway as RAD26P, has beta-transducin (WD-40) repeats
Locus type CDS
Locus tag YALI0E21439g

Location

Species Yarrowia lipolytica Positions 2545729..2546991
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1263 (nuc.)
Previous locus YALI0E21417g Next locus YALI0E21461r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E21439g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E21439gYALI0E21439g_mRNA-001YALI0E21439g_CDS-001

Nucleotide sequence

 

>YALI0E21439g
ATGCTGTCGTTTATAAGAAGCCGTGAATCCGGAGTGCTGCCTCCCTGGGAGCTTAAGGAA
GCTCTATATGAAGAGTCTCTGAAGAATTACACGGCCGAACCTCATGCTACATTCCCCAAG
GTTCATGTTGGAGCTGTCAACTCGTTATCGGTGGAAAACGTGGACCAGAGATACCTGCTT
AGTGGAGGCGCCGATTCCAGTATTCGTTTGTGGGATCTGGAATTGGACGCTCGCAAGGAT
TGGAAGAGTCTTAATTCGAACGATGGAGTGGAGTACTCGCAGTTGGCGTCGATTGACCGT
CAGAAGGGACACAAGTACGGAGTTTCCCACGTCCAATGGTGGCCTCATGATTCGGGGCTG
TTTGTGACGACTTCATTTGACGGAACAGCCAAGGTCTGGGACACAAACTCGATGCAGGAA
GCGTACAAGTTCGATCTGGGAACGCGTATATACAGCGCGGACATCAGCAGCGTGGGAGAA
CATGCTATGGTTGCTACGGCTGCTGACCATCCATTTGTGCGGTTATTGGACCTGCGAACC
ACGGCAGCAGCTCAGATTCTCAAGGGCCATGATGGGAAAGTTCTGACCACCAAATGGTCC
CCGACTCATGGATCTCTGATTGCGACAGGAGGCACTGATGGAAGTGTGCGGTTGTGGGAC
GTTCGACGCAGTGACTCGTGTGTGCTCATGATGGACCATACTCTGACGCCAACAGCGCAG
AGTAACCCGCTCAGAAGAGGAGTAGATAAGCGTCTCAGTCACCCCAGAGCCCACAGAGCT
GCTACCAACGGTCTCTGTTGGATGCCTGACGGCTCCACATTGTTGTCTTTTGGTAATGAC
GAAAAGCTGCGATTGTGGGACTTGTTACCAGCCGAGGGAATGAACAAACTGGTCAACTAT
GGTCCGTTCCTGCGAAACAAGTTTCTCCAGACAATTAACCCCTGCCTCATGTTCCAGAAT
CACGAGACCCACAAGGTCATGGTCCCCAGTGACTCGGGCGAGATCTTCATGTATCAAGTT
GAAGACGGCAAGATGGTTTGTCGGTTGAGTCGGGGCCATGATGTTGCACGGTCAGCGTGT
GTGACCGGAAGAGGATACGGATATGAAGATTACTTTTCGGGATCCTTGGACGGAAAGATT
ACGAGATGGTCACCTCATTATGAGAGGCCGACAGTGGCTTTGGATGGCAAGAAGAAGAGG
GGTGTGTTGGATGATATCCATGATGAAATGAAGGCGAATGAGCGGGAAATGGGCGAGCAA
TGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E21439g_CDS-001

Protein length: 421 aa.
Product: Conserved hypothetical protein

>YALI0E21439g_CDS-001 MLSFIRSRESGVLPPWELKEALYEESLKNYTAEPHATFPKVHVGAVNSLSVENVDQRYLL
SGGADSSIRLWDLELDARKDWKSLNSNDGVEYSQLASIDRQKGHKYGVSHVQWWPHDSGL
FVTTSFDGTAKVWDTNSMQEAYKFDLGTRIYSADISSVGEHAMVATAADHPFVRLLDLRT
TAAAQILKGHDGKVLTTKWSPTHGSLIATGGTDGSVRLWDVRRSDSCVLMMDHTLTPTAQ
SNPLRRGVDKRLSHPRAHRAATNGLCWMPDGSTLLSFGNDEKLRLWDLLPAEGMNKLVNY
GPFLRNKFLQTINPCLMFQNHETHKVMVPSDSGEIFMYQVEDGKMVCRLSRGHDVARSAC
VTGRGYGYEDYFSGSLDGKITRWSPHYERPTVALDGKKKRGVLDDIHDEMKANEREMGEQ
*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG