YALI0E21395g

Overview

Description weakly similar to uniprot|Q9UTK6 Schizosaccharomyces pombe SPAC1486.03c G-patch domain- containing protein
Locus type CDS
Locus tag YALI0E21395g

Location

Species Yarrowia lipolytica Positions 2541508..2543428
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1921 (nuc.)
Previous locus YALI0E21373g Next locus YALI0E21417g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E21395g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E21395gYALI0E21395g_mRNA-001YALI0E21395g_CDS-001

Nucleotide sequence

 

>YALI0E21395g
ATGCCTTCAGTGACGGACTATATCAAACAACAAAACGAAAAGAAGCTGGAAAACAGGACA
GACTCGCATTCACGATTCAAGCCGTATGGAATTGGAGCTTCTCTGCTCGCAAAAATGGGT
TATAAGGCTGGCCAGGGTCTAGGAAAAGATGGCCAGGGTATTACTCGACCCATTGAACAA
CAGGGTAGTGTGAGAGGACAAGGCCTGGGTGCTCAGACAGCATTCACAAAGAGCAGAGAC
AAGGAGGATGAGGAGATCGATTCGGACTCTGATTCTGATGTCGACAATGTCGTAGACACT
CCTGTGACGTTCAAGAAGAGCAAGCCAAAAAGCATCTACAAGACTGTGGAGGAGCTGAGA
GAGTCTGGCATTGTCATAGACGAAGATGTGCTCAAAAAGGCGATTGACATGCGACCTGAG
GGCTATGAAAGTGTACCTTCGGTTGCCATCACCTCGCTTGAGTCTTTGAGACTTGAACTG
GAGCGTCTGCAGACGGAAAATGAACATCTACGAACCCGTCATGTGTTTGTGTCTGAGCAG
ATAGCAGGAGTGAAAGAAGACTTGGAGAACATGACAAATGAGGAAACAGAATCAGAAGAG
CAGCTGACGAGGTTGCAGAAATGCATGGACCTGATGACTACTAATCCTGACAGTCTAGAT
ACGTTATTGGAGTGCTACTCTACTTTGCTACAAAGTGACCCAACAGACATGTGGTTGAGT
GTGGTGGGTCCGGTGTATAATCATGTGACTACTTCTTGGAATGTTTCCCAGCAACCAAGC
TTCCTTTTGGACAAGATCATAGAGTCTCCTGCAGAGCTCCGTGTGGTTCTGCTGGCTCGA
GTTTGGCTCCCCAAGGTGAGTTCTGAGCTTATCAACAACTGGGACTCTAACCTGGCCATT
TCTTTGCTTGAGTCTTGGGGTCCTGTTCTTCCTGACTTTGTGAGAACCGTCTTCATTCAT
CGAGTGGTGGTTCCGAAGCTGAACACCATCATTGTCTGGAACCAGAAATCCCACGATTTG
TCATTCTTACGTCAATGGTGGCCGTTCCTGTCATTTACAGACAAGAACGTTGTTCAGAAC
CGTCTTCAGACTGTAATTGGTCAGGCTCTTCGAAGCTGGAACGCCCAGAACGCGCCGCCT
GGTCTTCCTGAAGCTTGTGTCTCCTTATCACCATTTCTGGATGTGCCTTCTTTGGTGGTC
AAGAACCTGCTGCCTAATTTGTCTCGTTTTTTACGTCGGAATCTTGTCATTAACCCTGCC
GACCAAGATACACAGCCTCTTGCAGATTTTTTCCTCTGGCAAAGGGTTCTGTCTTCGGAG
ATGATTGGGGTGGTATTGGATTCGGAGTTTTTCCCCAAATGGAAGAAAACACTCAAACAA
TGGCTTGAATCGGGTTTGACTGAAGATATGAGTGTTGTTATTCAGCAGGCCGGAGCCTGG
TTTTCCATCTGGCGAGATTTCTTCTCCCAGAACCTCACCGTTCCTGTCGATGTTGTTTCT
CAACAATTCGAGCAGGTAGGACGCGCTCTACAAACCATTCAGAAGCTCATAGCTGTCACA
CGGGAAGATATTGACGCTATTTGGGCCGATATGACCGCTTCCAAGGTCGATCTCACCCCT
TCAGTGCCCTCCAAGCCTGTGGCAGACACTATCAGCGTGTCTGTGACCCTGCATGATGTC
ATATACGAGCTCTGTGTCGCTTCTGGCTTGTTATATCGCACCACAGACCGTTTCCACGAC
CAGAAAGGGCTCCCTTTGTATGCCATTGAAGGGGGTAAGCAGGTGGTTATTTGTTATGTG
GACAACTATGTGTTTTATGCCAAGTCAGGAGGAACTTATGAGCCTCGGTACATTGAAGAG
GTGGTCAAGGAGGTGTCCGTTGTATAATATTGTACTTTAATCTATTTATTCTCTTCATTC
T

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E21395g_CDS-001

Protein length: 629 aa.
Product: Conserved hypothetical protein

>YALI0E21395g_CDS-001 MPSVTDYIKQQNEKKLENRTDSHSRFKPYGIGASLLAKMGYKAGQGLGKDGQGITRPIEQ
QGSVRGQGLGAQTAFTKSRDKEDEEIDSDSDSDVDNVVDTPVTFKKSKPKSIYKTVEELR
ESGIVIDEDVLKKAIDMRPEGYESVPSVAITSLESLRLELERLQTENEHLRTRHVFVSEQ
IAGVKEDLENMTNEETESEEQLTRLQKCMDLMTTNPDSLDTLLECYSTLLQSDPTDMWLS
VVGPVYNHVTTSWNVSQQPSFLLDKIIESPAELRVVLLARVWLPKVSSELINNWDSNLAI
SLLESWGPVLPDFVRTVFIHRVVVPKLNTIIVWNQKSHDLSFLRQWWPFLSFTDKNVVQN
RLQTVIGQALRSWNAQNAPPGLPEACVSLSPFLDVPSLVVKNLLPNLSRFLRRNLVINPA
DQDTQPLADFFLWQRVLSSEMIGVVLDSEFFPKWKKTLKQWLESGLTEDMSVVIQQAGAW
FSIWRDFFSQNLTVPVDVVSQQFEQVGRALQTIQKLIAVTREDIDAIWADMTASKVDLTP
SVPSKPVADTISVSVTLHDVIYELCVASGLLYRTTDRFHDQKGLPLYAIEGGKQVVICYV
DNYVFYAKSGGTYEPRYIEEVVKEVSVV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG